The increasing frequency of Sargassum spp. blooms represents a global environmental challenge, impacting coastal ecosystems and requiring sustainable management strategies. This study evaluates the potential of Sargassum spp. extract as an encapsulating material for biological pest control, contributing to marine waste valorization. Pelagic Sargassum spp. collected from the Havana coast was processed to obtain an alginate-rich extract, which was used to encapsulate Beauveria bassiana conidia via ionic gelation. FTIR confirmed characteristic carboxylate absorption bands, indicating structural similarities with commercial alginate, while TGA demonstrated comparable thermal behavior. Beads exhibited consistent dimensions (0.5–3 mm) with irregular post-drying shapes. Encapsulation efficiency yielded a conidial concentration of 1.43 × 10⁸ conidia per mL, ensuring retention within the matrix. Long-term viability was confirmed as conidia remained viable and able to grow after six months, potentially benefiting from extract-derived compounds. These findings highlight the potential of repurposing Sargassum spp. for sustainable agricultural applications, advancing environmentally friendly pest management while addressing the ecological burden of excessive Sargassum accumulation.