Mahsa Servati

Dr. Mahsa Servati

Purdue University West Lafayette, West Lafayette, Indiana, USA
+1
orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 July 2021 in PLOS Computational Biology
Verified
Journal Article
Open access
PDF file
MHMichael C. Holcomb
Michael C. Holcomb
GGGuo-Jie Jason Gao
Guo-Jie Jason Gao
MSMahsa Servati
Mahsa Servati
DSDylan Schneider
Dylan Schneider
PMPresley K. McNeely
Presley K. McNeely
JBJerzy Blawzdziewicz
Jerzy Blawzdziewicz
Formation of the ventral furrow in theDrosophilaembryo relies on the apical constriction of cells in the ventral region to produce bending forces that drive tissue invagination. In our recent paper we observed that apical constrictions during the initial phase of ventral furrow formation produce elongated patterns of cellular constriction chains prior to invagination and argued that these are indicative of tensile stress feedback. Here, we quantitatively analyze the constriction patterns preceding ventral furrow formation and find that they are consistent with the predictions of our active-granular-fluid model of a monolayer of mechanically coupled stress-sensitive constricting particles. Our model shows that tensile feedback causes constriction chains to develop along underlying precursor tensile stress chains that gradually strengthen with subsequent cellular constrictions. As seen in both our model and available optogenetic experiments, this mechanism allows constriction chains to penetrate or circumvent zones of reduced cell contractility, thus increasing the robustness of ventral furrow formation to spatial variation of cell contractility by rescuing cellular constrictions in the disrupted regions.

23 April 2022 in Metabolites
Verified
Journal Article
Open access
PDF file
AAAhmad Abdulrahman Alhulail
Ahmad Abdulrahman Alhulail
MSMahsa Servati
Mahsa Servati
NONathan Ooms
Nathan Ooms
OAOguz Akin
Oguz Akin
ADAlp Dincer
Alp Dincer
Uzay EmirUzay Emir
Uzay Emir
A reliable and practical renal-lipid quantification and imaging method is needed. Here, the feasibility of an accelerated MRSI method to map renal fat fractions (FF) at 3T and its repeatability were investigated. A 2D density-weighted concentric-ring-trajectory MRSI was used for accelerating the acquisition of 48 × 48 voxels (each of 0.25 mL spatial resolution) without respiratory navigation implementations. The data were collected over 512 complex-FID timepoints with a 1250 Hz spectral bandwidth. The MRSI sequence was designed with a metabolite-cycling technique for lipid–water separation. The in vivo repeatability performance of the sequence was assessed by conducting a test–reposition–retest study within healthy subjects. The coefficient of variation (CV) in the estimated FF from the test–retest measurements showed a high degree of repeatability of MRSI-FF (CV = 4.3 ± 2.5%). Additionally, the matching level of the spectral signature within the same anatomical region was also investigated, and their intrasubject repeatability was also high, with a small standard deviation (8.1 ± 6.4%). The MRSI acquisition duration was ~3 min only. The proposed MRSI technique can be a reliable technique to quantify and map renal metabolites within a clinically acceptable scan time at 3T that supports the future application of this technique for the non-invasive characterization of heterogeneous renal diseases and tumors.

7 May 2021 in Physica Status Solidi (a)
Verified
Journal Article
Closed access
PDF file
CSChristopher Martin Stanley
Christopher Martin Stanley
BRBenjamin K. Rader
Benjamin K. Rader
BLBraxton H. D. Laster
Braxton H. D. Laster
MSMahsa Servati
Mahsa Servati
SEStefan K. Estreicher
Stefan K. Estreicher

18 March 2022 in Preprints.org
Verified
Preprint
Open access
PDF file
AAAhmad Abdulrahman Alhulail
Ahmad Abdulrahman Alhulail
MSMahsa Servati
Mahsa Servati
NONathan Ooms
Nathan Ooms
OAOguz Akin
Oguz Akin
ADAlp Dincer
Alp Dincer
Uzay EmirUzay Emir
Uzay Emir
A reliable and practical renal-lipid quantification and imaging method is needed. Here, the feasibility of an accelerated MRSI method to map renal fat fractions (FF) at 3T and its repeatability were investigated. A 2D density-weighted concentric-ring-trajectory MRSI was used to accelerate acquiring 48×48 voxels (each of 0.25 ml spatial-resolution) without respiratory navigation implementations. The data was collected over 512 complex-FID timepoints with a 1250 Hz spectral bandwidth. The MRSI sequence was designed with a metabolite-cycling technique for lipid-water separation. The in vivo repeatability performance of the sequence was assessed by conducting a test-reposition-retest study within healthy subjects. The coefficient of variation (CV) in the estimated FF from the test-retest measurements showed a high degree of repeatability of the MRSI-FF (CV= 4.3 ±2.5%). Additionally, the matching level of spectral signature within the same anatomical region was also investigated, and their intrasubject repeatability was also high, with a small standard deviation (8.1 ±6.4%). The MRSI acquisition duration was ~3 minutes only. The proposed MRSI technique can be a reliable technique to quantify and map renal metabolites within a clinically acceptable scan time at 3T that supports the future application of this technique for the non-invasive characterization of heterogeneous renal diseases and tumors.

1 December 2021 in Physica Status Solidi (a)
Verified
Journal Article
Open access
PDF file
CSChristopher Martin Stanley
Christopher Martin Stanley
BRBenjamin K. Rader
Benjamin K. Rader
BLBraxton H. D. Laster
Braxton H. D. Laster
MSMahsa Servati
Mahsa Servati
SEStefan K. Estreicher
Stefan K. Estreicher
Thermal Boundary Resistance Thermal boundary resistance is the largest impedance to heat transfer in many semiconductor devices. In article number 2100111, Christopher M. Stanley and co-workers demo...

16 June 2024 in Metabolites
Verified
Journal Article
Open access
PDF file
MSMahsa Servati
Mahsa Servati
CVCourtney N. Vaccaro
Courtney N. Vaccaro
EDEmily E. Diller
Emily E. Diller
RPRenata Pellegrino
Renata Pellegrino
FMFernanda Mafra
Fernanda Mafra
JPJason G. Parker
Jason G. Parker
Intratumoral heterogeneity (ITH) complicates the diagnosis and treatment of glioma, partly due to the diverse metabolic profiles driven by underlying genomic alterations. While multiparametric imaging enhances the characterization of ITH by capturing both spatial and functional variations, it falls short in directly assessing the metabolic activities that underpin these phenotypic differences. This gap stems from the challenge of integrating easily accessible, colocated pathology and detailed genomic data with metabolic insights. This study presents a multifaceted approach combining stereotactic biopsy with standard clinical open-craniotomy for sample collection, voxel-wise analysis of MR images, regression-based GAM, and whole-exome sequencing. This work aims to demonstrate the potential of machine learning algorithms to predict variations in cellular and molecular tumor characteristics. This retrospective study enrolled ten treatment-naïve patients with radiologically confirmed glioma. Each patient underwent a multiparametric MR scan (T1W, T1W-CE, T2W, T2W-FLAIR, DWI) prior to surgery. During standard craniotomy, at least 1 stereotactic biopsy was collected from each patient, with screenshots of the sample locations saved for spatial registration to pre-surgical MR data. Whole-exome sequencing was performed on flash-frozen tumor samples, prioritizing the signatures of five glioma-related genes: IDH1, TP53, EGFR, PIK3CA, and NF1. Regression was implemented with a GAM using a univariate shape function for each predictor. Standard receiver operating characteristic (ROC) analyses were used to evaluate detection, with AUC (area under curve) calculated for each gene target and MR contrast combination. Mean AUC for five gene targets and 31 MR contrast combinations was 0.75 ± 0.11; individual AUCs were as high as 0.96 for both IDH1 and TP53 with T2W-FLAIR and ADC, and 0.99 for EGFR with T2W and ADC. These results suggest the possibility of predicting exome-wide mutation events from noninvasive, in vivo imaging by combining stereotactic localization of glioma samples and a semi-parametric deep learning method. The genomic alterations identified, particularly in IDH1, TP53, EGFR, PIK3CA, and NF1, are known to play pivotal roles in metabolic pathways driving glioma heterogeneity. Our methodology, therefore, indirectly sheds light on the metabolic landscape of glioma through the lens of these critical genomic markers, suggesting a complex interplay between tumor genomics and metabolism. This approach holds potential for refining targeted therapy by better addressing the genomic heterogeneity of glioma tumors.