Trichuriosis is a disease in mammals caused by the whipworms of the genus Trichuris. These worms are known for the high disease burden they cause in humans and domestic animals, especially in sub-Saharan Africa. In this study, we investigated the prevalence and seasonal variations of Trichuris worms in multimammate rats (Mastomys natalensis). The study was conducted between January and November 2021 in Tanzania, in two regions (Morogoro and Iringa) that differ in their eco-climatic conditions. Removal trapping was conducted using Sherman^® live traps during the rainy and dry seasons. The gastrointestinal tracts of captured rodents were screened for the presence of Trichuris worms, which were identified using morphological keys. A total of 200 M. natalensis rats were collected from each of the regions, with 100 animals in each season. For Morogoro, the overall prevalence of Trichuris worms in M. natalensis was 36% (n = 72), of which 42% (n = 42) and 30% (n = 30) were for the rainy and dry seasons, respectively. For Iringa, the overall prevalence was 65% (n = 130), of which there were 80% (n = 80) and 50% (n = 50) for the rainy and dry seasons, respectively. Trichuris worm infections were significantly higher during the rainy season in Iringa than in Morogoro; however, no significant difference in infections between males and females was noted in either region or season. Other helminths detected were Strongyloides spp., Capillaria spp., Hymenolepis spp. and eggs of a helminth that has yet to be confirmed, possibly an Anoplocephalid species. Since M. natalensis is the most important pest species in sub-Saharan Africa, and is a carrier of several zoonotic helminths, there is a need for improved surveillance of helminths infections in the studied regions, in order to establish strategic control programs to reduce their adverse impacts on health.

Background: The antimicrobial resistance catastrophe is a growing global health threat and predicted to be worse in developing countries. Phages for Global Health (PGH) is training scientists in these regions to isolate relevant therapeutic phages for pathogenic bacteria within their locality, and thus contributing to making phage technology universally available. Materials and Methods: During the inaugural PGH workshop in East Africa, samples from Ugandan municipal sewage facilities were collected and two novel Escherichia coli lytic phages were isolated and characterized. Results: The phages, UP19 (capsid diameter ∼100 nm, contractile tail ∼120/20 nm) and UP30 (capsid diameter ∼70 nm, noncontractile tail of ∼170/20 nm), lysed ∼82% and ∼36% of the 11 clinical isolates examined, respectively. The genomes of UP19 (171.402 kb, 282 CDS) and UP30 (49.834 kb, 75 CDS) closely match the genera Dhakavirus and Tunavirus , respectively. Conclusion: The phages isolated have therapeutic potential for further development against E. coli infections.

Gastrointestinal parasites pose a significant threat to human and domestic animal health across Africa. Despite numerous studies on ectoparasitism and endoparasitism in small mammals across different regions of the continent, the ecological role of rodents in transmission dynamics of gastrointestinal helminths remains poorly understood. This study aimed to identify gastrointestinal helminths in rodents and evaluate the influence of host-related factors, ectoparasite infestations, and environmental variables on helminth prevalence at wildlife-human interfaces in Tanzania. Gastrointestinal helminth eggs were quantified using the modified McMaster method on samples from captured rodents. Correlations between parasitological data, host scaled mass index (SMI), and ectoparasite intensity were analyzed. Generalized linear mixed models (GLMMs) were employed to assess helminth occurrence in relation to host demographics, ectoparasite load, and environmental factors. The overall prevalence of gastrointestinal helminths was 53.59%. Seven distinct helminth egg types were identified, representing two major taxa: nematodes and cestodes. Among the nematodes, eggs of Trichuris spp., Strongyloides spp., Syphacia spp., Capillariidae and Spirurida were identified. Cestode eggs present were Hymenolepis-like eggs and eggs of Anoplocephalidae. Whipworms (Trichuris spp.) exhibited the highest prevalence (23.2%), followed by threadworms (Strongyloides spp.) at 22.1%. Anoplocephalid eggs showed the lowest prevalence, at 0.56%. The occurrence of gastrointestinal helminths in rodents was significantly associated with increased SMI and ectoparasite (flea and mite) infestations, while also varying across rodent species and collection sites. This study highlights the presence of potentially zoonotic helminths, including capillariids and Hymenolepis-like species, in rodents at wildlife-human interfaces. Furthermore, it identifies associations between gastrointestinal helminth infections and host body condition, as well as the intensity of ectoparasite infestations. These findings underscore the importance of considering host and environmental factors in understanding helminth transmission dynamics and their potential impact on public and veterinary health.

Bartonellosis is a vector-borne disease which is increasingly threatening the health of humans and animals worldwide consequent to the growing wildlife-animals-human interactions. Little is known about the epidemiology of this disease in Tanzania. In this study we investigated and characterized Bartonella species in small mammals’ ectoparasites from potentially high-risk areas in the country. A total of 141 ectoparasites pools of mites, fleas, ticks, and lice were analyzed using conventional PCR and sequencing. Bartonella DNA was detected in 34.8 % of the tested ectoparasite pools, with mites at 32.9 %, fleas at 40 %, ticks at 12.5 %, and lice at 50 %. Phylogenetic analysis showed that the Bartonella spp. genotypes were closely related to those found in Uganda, Kenya, and South Africa. Different genotypes with independent haplotypes were observed, although most Bartonella spp. from fleas shared the same haplogroup. The confirmed presence of Bartonella elizabethae and Bartonella tribocorum in field and house rodents emphasizes the prevailing transmission risk of zoonotic infections in the study areas and beyond. Screening of humans, companion animals, and livestock in potentially high-risk areas in Tanzania is necessary in order to inform the development of responsive surveillance and control strategies.

The proximity of humans to small mammals and their ectoparasites at wildlife-human interfaces in Africa creates favorable conditions for the spillover of zoonotic pathogens. Anaplasmaceae and Rickettsiaceae bacteria are emerging threats due to their genomic adaptability and resilience to environmental changes. This systematic review and meta-analysis examined the distribution and prevalence of these pathogens in African small mammals and their ectoparasites. A comprehensive search across five electronic databases yielded 37 studies meeting predefined inclusion and exclusion criteria. The most frequently reported pathogens were Rickettsia felis (11 studies), Rickettsia massiliae (8 studies), and Rickettsia typhi (7 studies). A meta-analysis using a random-effects model was conducted separately for small mammals and ectoparasites. In small mammals, the highest prevalence was observed for Anaplasma spp. (15.17%; 95% CI 8-26.9%), Rickettsia helvetica (14.65%; 95% CI 9.09–22.75%), R. felis (12%; 95% CI 6.13–22.18%), R. massiliae (10.75%; 95% CI 0.6-70.55%), and Ehrlichia spp. (10.35%; 95% CI 4.13–23.66%). Among ectoparasites, the highest prevalence was found in ticks for R. africae (41.53%; 95% CI 13.53–76.33%) and R. massiliae (30.55%; 95% CI 8.96–66.29%). In fleas, R. felis (21.68%; 95% CI 8.67–44.68%) was most prevalent. This analysis underscores the importance of molecular detection tools, such as the combination of quantitative real-time polymerase chain reaction (qPCR) and sequencing for detection and identification of Rickettsiales, and highlights the dominance of R. africae, R. felis, and R. massiliae in ectoparasites, particularly in Eastern and Northern Africa. The study also underscores the impact of sample size and geographical regional differences in prevalence estimates. This review was registered in the international database of Prospectively Registered Systematic Reviews (PROSPERO) with ID: CRD42024552324.

Rodents play an important role in the transmission of zoonotic diseases. This study investigated the prevalence of Leptospira spp. and Bartonella spp. in Mastomys natalensis and its ectoparasites (fleas and mites) in selected villages of Morogoro, Tanzania. Mastomys natalensis were captured live in fallow habitats using Sherman^® traps and anesthetized using Halothane. Blood samples were obtained from the retroorbital sinus Ectoparasites were removed from the fur using a hard brush and preserved in 70 % ethanol. Real time–qPCR was used to detect Leptospira spp. and Bartonella spp. from Mastomys natalensis blood and ectoparasites respectively. The study revealed a relatively larger number of males than females captures. Leptospira spp. was demonstrated in one out of 100 Mastomys natalensis. For Bartonella spp., prevalence of (14 %) was recorded in mites with a higher proportion in mites from adult male Mastomys natalensis than females. Upon Sanger sequencing, four positive samples showed a complete sequence of the ITS gene. Indicating that all samples belonged to Uncultured Bartonella. Low prevalence of Leptospira spp. and a high prevalence of Bartonella spp. was observed in Mastomys natalensis. Further exploration of rodent pathogens is recommended to raise awareness of the role of commensal rodents in disease transmission via their ectoparasites.