Penny Nymark

Dr. Penny Nymark

orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 May 2020 in Particle and Fibre Toxicology
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Journal Article
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SHSabina Halappanavar
Sabina Halappanavar
SBSybille van Den Brule
Sybille van Den Brule
PNPenny Nymark
Penny Nymark
LGLaurent Gaté
Laurent Gaté
CSCarole Seidel
Carole Seidel
UVUlla Vogel
Ulla Vogel
Toxicity testing and regulation of advanced materials at the nanoscale, i.e. nanosafety, is challenged by the growing number of nanomaterials and their property variants requiring assessment for potential human health impacts. The existing animal-reliant toxicity testing tools are onerous in terms of time and resources and are less and less in line with the international effort to reduce animal experiments. Thus, there is a need for faster, cheaper, sensitive and effective animal alternatives that are supported by mechanistic evidence. More importantly, there is an urgency for developing alternative testing strategies that help justify the strategic prioritization of testing or targeting the most apparent adverse outcomes, selection of specific endpoints and assays and identifying nanomaterials of high concern. The Adverse Outcome Pathway (AOP) framework is a systematic process that uses the available mechanistic information concerning a toxicological response and describes causal or mechanistic linkages between a molecular initiating event, a series of intermediate key events and the adverse outcome. The AOP framework provides pragmatic insights to promote the development of alternative testing strategies. This review will detail a brief overview of the AOP framework and its application to nanotoxicology, tools for developing AOPs and the role of toxicogenomics, and summarize various AOPs of relevance to inhalation toxicity of nanomaterials that are currently under various stages of development. The review also presents a network of AOPs derived from connecting all AOPs, which shows that several adverse outcomes induced by nanomaterials originate from a molecular initiating event that describes the interaction of nanomaterials with lung cells and involve similar intermediate key events. Finally, using the example of an established AOP for lung fibrosis, the review will discuss various in vitro tests available for assessing lung fibrosis and how the information can be used to support a tiered testing strategy for lung fibrosis. The AOPs and AOP network enable deeper understanding of mechanisms involved in inhalation toxicity of nanomaterials and provide a strategy for the development of alternative test methods for hazard and risk assessment of nanomaterials.

11 May 2011 in Genes, Chromosomes and Cancer
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Journal Article
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PNPenny Nymark
Penny Nymark
MGMohamed Guled
Mohamed Guled
IBIoana Borze
Ioana Borze
AFAli Faisal
Ali Faisal
Leo LahtiLeo Lahti
Leo Lahti
SKSakari Knuutila
Sakari Knuutila

20 May 2021 in Nature Nanotechnology
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Nina JeliazkovaNina Jeliazkova
Nina Jeliazkova
Margarita D. ApostolovaMargarita D. Apostolova
Margarita D. Apostolova
CACristina Andreoli
Cristina Andreoli
FBFlavia Barone
Flavia Barone
ABAndrew Barrick
Andrew Barrick
PNPenny Nymark
Penny Nymark

1 November 2013 in Toxicology
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Journal Article
Open access
PNPenny Nymark
Penny Nymark
JCJulia Catalán
Julia Catalán
SSSatu Suhonen
Satu Suhonen
HJHilkka Järventaus
Hilkka Järventaus
RBRenie Birkedal
Renie Birkedal
HNHannu Norppa
Hannu Norppa
Silver nanoparticles (AgNPs) are widely utilized in various consumer products and medical devices, especially due to their antimicrobial properties. However, several studies have associated these particles with toxic effects, such as inflammation and oxidative stress in vivo and cytotoxic and genotoxic effects in vitro. Here, we assessed the genotoxic effects of AgNPs coated with polyvinylpyrrolidone (PVP) (average diameter 42.5±14.5 nm) on human bronchial epithelial BEAS 2B cells in vitro. AgNPs were dispersed in bronchial epithelial growth medium (BEGM) with 0.6 mg/ml bovine serum albumin (BSA). The AgNP were partially well-dispersed in the medium and only limited amounts (ca. 0.02 μg Ag(+) ion/l) could be dissolved after 24h. The zeta-potential of the AgNPs was found to be highly negative in pure water but was at least partially neutralized in BEGM with 0.6 mg BSA/ml. Cytotoxicity was measured by cell number count utilizing Trypan Blue exclusion and by an ATP-based luminescence cell viability assay. Genotoxicity was assessed by the alkaline single cell gel electrophoresis (comet) assay, the cytokinesis-block micronucleus (MN) assay, and the chromosomal aberration (CA) assay. The cells were exposed to various doses (0.5-48 μg/cm(2) corresponding to 2.5-240 μg/ml) of AgNPs for 4 and 24 h in the comet assay, for 48 h in the MN assay, and for 24 and 48 h in the CA assay. DNA damage measured by the percent of DNA in comet tail was induced in a dose-dependent manner after both the 4-h and the 24-h exposures to AgNPs, with a statistically significant increase starting at 16 μg/cm(2) (corresponding to 60.8 μg/ml) and doubling of the percentage of DNA in tail at 48 μg/cm(2). However, no induction of MN or CAs was observed at any of the doses or time points. The lack of induction of chromosome damage by the PVP-coated AgNPs is possibly due to the coating which may protect the cells from direct interaction with the AgNPs, either by reducing ion leaching from the particles or by causing extensive agglomeration of the nanoparticles, with a possible reduction of the cellular uptake.

8 December 2004 in Genes, Chromosomes and Cancer
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HWHarriet Wikman-Kocher
Harriet Wikman-Kocher
PNPenny Nymark
Penny Nymark
AVAki Väyrynen
Aki Väyrynen
SJSonata Jarmalaite
Sonata Jarmalaite
AKAnne Kallioniemi
Anne Kallioniemi
SASisko Anttila
Sisko Anttila

1 March 2007 in BMC Genomics
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Journal Article
Open access
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PNPenny Nymark
Penny Nymark
PLPamela M Lindholm
Pamela M Lindholm
MKMikko V Korpela
Mikko V Korpela
Leo LahtiLeo Lahti
Leo Lahti
SRSalla Ruosaari
Salla Ruosaari
SKSakari Knuutila
Sakari Knuutila
Background: Asbestos has been shown to cause chromosomal damage and DNA aberrations. Exposure to asbestos causes many lung diseases e.g. asbestosis, malignant mesothelioma, and lung cancer, but the disease-related processes are still largely unknown. We exposed the human cell lines A549, Beas-2B and Met5A to crocidolite asbestos and determined time-dependent gene expression profiles by using Affymetrix arrays. The hybridization data was analyzed by using an algorithm specifically designed for clustering of short time series expression data. A canonical correlation analysis was applied to identify correlations between the cell lines, and a Gene Ontology analysis method for the identification of enriched, differentially expressed biological processes. Results: We recognized a large number of previously known as well as new potential asbestos-associated genes and biological processes, and identified chromosomal regions enriched with genes potentially contributing to common responses to asbestos in these cell lines. These include genes such as the thioredoxin domain containing gene (TXNDC) and the potential tumor suppressor, BCL2/adenovirus E1B 19kD-interacting protein gene (BNIP3L), GO-terms such as "positive regulation of I-kappaB kinase/NF-kappaB cascade" and "positive regulation of transcription, DNA-dependent", and chromosomal regions such as 2p22, 9p13, and 14q21. We present the complete data sets as Additional files. Conclusion: This study identifies several interesting targets for further investigation in relation to asbestos-associated diseases.