Tissues, such as bone, tendon, and ligaments, contain a high fraction of components with "short" and "ultrashort" transverse relaxation times and therefore have short mean transverse relaxation times. With conventional magnetic resonance imaging (MRI) sequences that employ relatively long echo times (TEs), there is no opportunity to encode the decaying signal of short and ultrashort T₂/T₂* tissues before it has reached zero or near zero. The clinically compatible ultrashort TE (UTE) sequence has been increasingly used to study the musculoskeletal system. This article reviews the UTE sequence as well as various modifications that have been implemented since its introduction. These modifications have been used to improve efficiency or contrast as well as provide quantitative analysis. This article reviews several clinical musculoskeletal applications of UTE. J. Magn. Reson. Imaging 2015;41:870–883. © 2014 Wiley Periodicals, Inc.

Although 1 in 9 American men will receive a diagnosis of prostate cancer (PC), most men with this diagnosis will not die from it, as most PCs are indolent. However, there is a subset of patients in which the once-indolent PC becomes metastatic and eventually, fatal. In this study, we analyzed microbial compositions of intratumor bacteria in PC to determine the influence of the microbiome on metastatic growth. Using large-scale RNA-sequencing data and corresponding clinical data, we correlated the abundance of microbes to immune pathways and PC risk factors, identifying specific microbes that either significantly deter or contribute to cancer aggressiveness. Interestingly, most of the microbes we found appeared to play anti-tumor roles in PC. Since these anti-tumor microbes were overrepresented in tumor samples, we believe that microbes thrive in the tumor microenvironment, outcompete cancer cells, and directly mitigate tumor growth by recruiting immune cells. These include Listeria monocytogenes, Methylobacterium radiotolerans JCM 2831, Xanthomonas albilineans GPE PC73, and Bradyrhizobium japonicum, which are negatively correlated with Gleason score, Tumor-Node-Metastasis (TNM) stage, prostate-specific antigen (PSA) level, and Androgen Receptor (AR) expression, respectively. We also identified microbes that contribute to tumor growth and are positively correlated with genomic alterations, dysregulated immune-associated (IA) genes, and prostate cancer stem cells (PCSC) genes.

To determine the prevalence of magnetic resonance (MR) imaging abnormalities after metal-on-metal total hip arthroplasty and to determine whether presence of symptoms correlates with findings at MR imaging. This HIPAA-compliant study was approved by the institutional review board, and informed consent was waived. MR imaging was performed with conventional sequences and a 1.5-T clinical imager in 192 hips (174 patients) evaluated during a 15-month period. Two observers retrospectively reviewed the images for the presence and size of pseudotumor, communication with the pseudocapsule, wall thickness, synovial hypertrophy, compartmentalization, solid components, foci of wall susceptibility, osteolysis, bone marrow edema, abductor muscle or tendon abnormality, and Anderson MR grade (normal, infection, or varying severity of metal-on-metal disease). These findings were compared between asymptomatic and symptomatic patients by using the Fisher exact test or the Wilcoxon-Mann-Whitney test, as appropriate. Prevalence of pseudotumors per patient and per hip was 69% (120 of 174 patients, 132 of 192 hips). Bone marrow edema (present in six asymptomatic patients and 19 patients with pain, P < .01) and tendon tearing (present in five asymptomatic patients and 13 patients with pain, P < .05) were predictors of pain. Presence of symptoms was not correlated with presence (P = .4151) or size of pseudotumors. Anderson MR grade binarized into normal versus abnormal showed moderate agreement between readers (κ = 0.439) but was also not correlated with symptoms (P = .6648). The presence of bone marrow edema and abductor tendon tears but not the presence or size of pseudotumor was associated with patient pain.

MRI biomarkers such as T₂, T₂* and T_1rho have been widely used, but are confounded by the magic angle effect. The purpose of this study is to investigate the use of the two‐dimensional ultrashort echo time magnetization transfer (UTE‐MT) sequence for potential magic angle independent MR biomarkers. Magnetization transfer was investigated in cadaveric Achilles tendon samples using the UTE‐MT sequence at five MT powers and five frequency offsets ranging from 2 to 50 kHz. The protocol was applied at five sample orientations ranging from 0 to 90° relative to the B₀ field. The results were analyzed with a two‐pool quantitative MT model. Multiple T_E data were also acquired and mono‐exponential T₂* was calculated for each orientation. Macromolecular proton fractions and exchange rates derived from UTE‐MT modeling did not appreciably change between the various orientations, whereas the T₂* relaxation time demonstrated up to a sixfold increase from 0° to 55°. The UTE‐MT technique with two‐pool modeling shows promise as a clinically compatible technique that is resistant to the magic angle effect. This method provides information on the macromolecular proton pool that cannot be directly obtained by other methods, including regular UTE techniques.

An intra-pancreatic microbiota was recently discovered in several prominent studies. Since pancreatic adenocarcinoma (PAAD) is one of the most lethal cancers worldwide, and the intratumor microbiome was found to be a significant contributor to carcinogenesis in other cancers, this study aims to characterize the PAAD microbiome and elucidate how it may be associated with PAAD prognosis. We further explored the association between the intra-pancreatic microbiome and smoking and gender, which are both risk factors for PAAD. RNA-sequencing data from The Cancer Genome Atlas (TCGA) were used to infer microbial abundance, which was correlated to clinical variables and to cancer and immune-associated gene expression, to determine how microbes may contribute to cancer progression. We discovered that the presence of several bacteria species within PAAD tumors is linked to metastasis and immune suppression. This is the first large-scale study to report microbiome-immune correlations in human pancreatic cancer samples. Furthermore, we found that the increased prevalence and poorer prognosis of PAAD in males and smokers are linked to the presence of potentially cancer-promoting or immune-inhibiting microbes. Further study into the roles of these microbes in PAAD is imperative for understanding how a pro-tumor microenvironment may be treated to limit cancer progression.

A new three-dimensional short repetition time adiabatic inversion recovery–prepared ultrashort echo time sequence provided selective imaging of brain myelin with water signals efficiently suppresse... Background Water signal contamination is a major challenge for direct ultrashort echo time (UTE) imaging of myelin in vivo because water contributes most of the signals detected in white matter. Pu...