Matthew J. Baker

Dr. Matthew J. Baker

School of Medicine, Faculty of Clinical and Biomedical Sciences, University of Central Lancashire, PR1 2HE & Dxcover Ltd, Royal College Building, Glasgow G1 1XW, UK
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Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 July 2014 in Nature Protocols
Verified
Journal Article
Closed access
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Matthew J. BakerMatthew J. Baker
Matthew J. Baker
JTJúlio Trevisan
Júlio Trevisan
PBPaul Bassan
Paul Bassan
BRBhargava Rohit
Bhargava Rohit
HBHolly J Butler
Holly J Butler
FMFrancis L Martin
Francis L Martin

11 February 2023 in Journal of Translational Medicine
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Journal Article
Open access
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SCSiobhan Connal
Siobhan Connal
JCJames M. Cameron
James M. Cameron
ASAlexandra Sala
Alexandra Sala
PBPaul M. Brennan
Paul M. Brennan
DPDavid S. Palmer
David S. Palmer
Matthew J. BakerMatthew J. Baker
Matthew J. Baker
Cancer is a worldwide pandemic. The burden it imposes grows steadily on a global scale causing emotional, physical, and financial strains on individuals, families, and health care systems. Despite being the second leading cause of death worldwide, many cancers do not have screening programs and many people with a high risk of developing cancer fail to follow the advised medical screening regime due to the nature of the available screening tests and other challenges with compliance. Moreover, many liquid biopsy strategies being developed for early detection of cancer lack the sensitivity required to detect early-stage cancers. Early detection is key for improved quality of life, survival, and to reduce the financial burden of cancer treatments which are greater at later stage detection. This review examines the current liquid biopsy market, focusing in particular on the strengths and drawbacks of techniques in achieving early cancer detection. We explore the clinical utility of liquid biopsy technologies for the earlier detection of solid cancers, with a focus on how a combination of various spectroscopic and -omic methodologies may pave the way for more efficient cancer diagnostics.

27 November 2015 in Chemical Society Reviews
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Journal Article
Closed access
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Matthew J. BakerMatthew J. Baker
Matthew J. Baker
SHShawn R. Hussain
Shawn R. Hussain
LLLila Lovergne
Lila Lovergne
VUValérie Untereiner
Valérie Untereiner
CHCaryn Hughes
Caryn Hughes
Ganesh D SockalingumGanesh D Sockalingum
Ganesh D Sockalingum
Vibrational spectroscopy can provide rapid, label-free, and objective analysis for the clinical domain. Spectroscopic analysis of biofluids such as blood components (e.g. serum and plasma) and others in the proximity of the diseased tissue or cell (e.g. bile, urine, and sputum) offers non-invasive diagnostic/monitoring possibilities for future healthcare that are capable of rapid diagnosis of diseases via specific spectral markers or signatures. Biofluids offer an ideal diagnostic medium due to their ease and low cost of collection and daily use in clinical biology. Due to the low risk and invasiveness of their collection they are widely welcomed by patients as a diagnostic medium. This review underscores recent research within the field of biofluid spectroscopy and its use in myriad pathologies such as cancer and infectious diseases. It highlights current progresses, advents, and pitfalls within the field and discusses future spectroscopic clinical potentials for diagnostics. The requirements and issues surrounding clinical translation are also considered.

27 February 2018 in The Analyst
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Journal Article
Closed access
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Matthew J. BakerMatthew J. Baker
Matthew J. Baker
Hugh ByrneHugh Byrne
Hugh Byrne
JCJohn Chalmers
John Chalmers
PGPeter Gardner
Peter Gardner
RGRoyston Goodacre
Royston Goodacre
JSJosep Sulé-Suso
Josep Sulé-Suso
Vibrational spectroscopies, based on infrared absorption and/or Raman scattering provide a detailed fingerprint of a material, based on the chemical content. Diagnostic and prognostic tools based on these technologies have the potential to revolutionise our clinical systems leading to improved patient outcome, more efficient public services and significant economic savings. However, despite these strong drivers, there are many fundamental scientific and technological challenges which have limited the implementation of this technology in the clinical arena, although recent years have seen significant progress in addressing these challenges. This review examines (i) the state of the art of clinical applications of infrared absorption and Raman spectroscopy, and (ii) the outstanding challenges, and progress towards translation, highlighting specific examples in the areas of in vivo, ex vivo and in vitro applications. In addition, the requirements of instrumentation suitable for use in the clinic, strategies for pre-processing and statistical analysis in clinical spectroscopy and data sharing protocols, will be discussed. Emerging consensus recommendations are presented, and the future perspectives of the field are assessed, particularly in the context of national and international collaborative research initiatives, such as the UK EPSRC Clinical Infrared and Raman Spectroscopy Network, the EU COST Action Raman4Clinics, and the International Society for Clinical Spectroscopy.

8 October 2019 in Nature Communications
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Journal Article
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HBHolly J. Butler
Holly J. Butler
PBPaul Brennan
Paul Brennan
JCJames Munro Cameron
James Munro Cameron
DFDuncan Finlayson
Duncan Finlayson
MHMark G. Hegarty
Mark G. Hegarty
Matthew J. BakerMatthew J. Baker
Matthew J. Baker
Non-specific symptoms, as well as the lack of a cost-effective test to triage patients in primary care, has resulted in increased time-to-diagnosis and a poor prognosis for brain cancer patients. A rapid, cost-effective, triage test could significantly improve this patient pathway. A blood test using attenuated total reflection (ATR)-Fourier transform infrared (FTIR) spectroscopy for the detection of brain cancer, alongside machine learning technology, is advancing towards clinical translation. However, whilst the methodology is simple and does not require extensive sample preparation, the throughput of such an approach is limited. Here we describe the development of instrumentation for the analysis of serum that is able to differentiate cancer and control patients at a sensitivity and specificity of 93.2% and 92.8%. Furthermore, preliminary data from the first prospective clinical validation study of its kind are presented, demonstrating how this innovative technology can triage patients and allow rapid access to imaging.

4 November 2008 in British Journal of Cancer
Verified
Journal Article
Open access
Matthew J. BakerMatthew J. Baker
Matthew J. Baker
EGE Gazi
E Gazi
MBMichael David Brown
Michael David Brown
JSJ H Shanks
J H Shanks
PGP Gardner
P Gardner
NCNoel Clarke
Noel Clarke
Fourier transform infrared (FTIR) spectroscopy is a vibrational spectroscopic technique that uses infrared radiation to vibrate molecular bonds within the sample that absorbs it. As different samples contain different molecular bonds or different configurations of molecular bonds, FTIR allows us to obtain chemical information on molecules within the sample. Fourier transform infrared microspectroscopy in conjunction with a principal component-discriminant function analysis (PC-DFA) algorithm was applied to the grading of prostate cancer (CaP) tissue specimens. The PC-DFA algorithm is used alongside the established diagnostic measures of Gleason grading and the tumour/node/metastasis system. Principal component-discriminant function analysis improved the sensitivity and specificity of a three-band Gleason score criterion diagnosis previously reported by attaining an overall sensitivity of 92.3% and specificity of 99.4%. For the first time, we present the use of a two-band criterion showing an association of FTIR-based spectral characteristics with clinically aggressive behaviour in CaP manifest as local and/or distal spread. This paper shows the potential for the use of spectroscopic analysis for the evaluation of the biopotential of CaP in an accurate and reproducible manner.