Emmanouil Flemetakis

Dr. Emmanouil Flemetakis

Molecular Biology laboratory, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 11855 Athens, Greece

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 September 2024 in Clinical Microbiology Reviews
Verified
Journal Article
Closed access
MSMaria Siopi
Maria Siopi
Dimitrios SklirosDimitrios Skliros
Dimitrios Skliros
PPPaschalis Paranos
Paschalis Paranos
NKNikoletta Koumasi
Nikoletta Koumasi
EFEmmanouil Flemetakis
Emmanouil Flemetakis
Iosif MeletiadisIosif Meletiadis
Iosif Meletiadis
SUMMARY: Despite the early recognition of their therapeutic potential and the current escalation of multidrug-resistant (MDR) pathogens, the adoption of bacteriophages into mainstream clinical practice is hindered by unfamiliarity with their basic pharmacokinetic (PK) and pharmacodynamic (PD) properties, among others. Given the self-replicative nature of bacteriophages in the presence of host bacteria, the adsorption rate, and the clearance by the host’s immunity, their PK/PD characteristics cannot be estimated by conventional approaches, and thus, the introduction of new considerations is required. Furthermore, the multitude of different bacteriophage types, preparations, and treatment schedules impedes drawing general conclusions on their in vivo PK/PD features. Additionally, the drawback of acquired bacteriophage resistance of MDR pathogens with clinical and environmental implications should be taken into consideration. Here, we provide an overview of the current state of the field of PK and PD of bacteriophage therapy with a focus on its application against MDR Gram-negative infections, highlighting the potential knowledge gaps and the challenges in translation from the bench to the bedside. After reviewing the in vitro PKs and PDs of bacteriophages against the four major MDR Gram-negative pathogens, Klebsiella pneumoniae , Acinetobacter baumannii complex, Pseudomonas aeruginosa , and Escherichia coli , specific data on in vivo PKs (tissue distribution, route of administration, and basic PK parameters in animals and humans) and PDs (survival and reduction of bacterial burden in relation to the route of administration, timing of therapy, dosing regimens, and resistance) are summarized. Currently available data merit close scrutiny, and optimization of bacteriophage therapy in the context of a better understanding of the underlying PK/PD principles is urgent to improve its therapeutic effect and to minimize the occurrence of bacteriophage resistance.

8 April 2025 in Applied Microbiology
Verified
Journal Article
Open access
PDF file
AKAikaterini Koletti
Aikaterini Koletti
Dimitrios SklirosDimitrios Skliros
Dimitrios Skliros
IDIrene Dervisi
Irene Dervisi
ARAndreas Roussis
Andreas Roussis
EFEmmanouil Flemetakis
Emmanouil Flemetakis
Microalgae are the primary producers in aquatic ecosystems, while simultaneously playing a vital role in various industrial sectors. Despite their significant ecological and bioeconomic importance, the impacts of oxidative stress on their populations remain poorly understood. In this mini-review, we summarize recent advancements in understanding oxidative stress modulation in microalgae, with a focus on responses to climate change-related stressors. Additionally, we compare the valuable insights obtained from multi-omics studies on specific biochemical pathways and genes, correlating the responses and mechanisms by which microalgae respond to oxidative stress among different species.

13 June 2018 in Plant and Soil
Verified
Journal Article
Closed access
PDF file
Dimitrios SklirosDimitrios Skliros
Dimitrios Skliros
CKChrysanthi Kalloniati
Chrysanthi Kalloniati
GKGeorgios Karalias
Georgios Karalias
GSGeorge N. Skaracis
George N. Skaracis
HRHeinz Rennenberg
Heinz Rennenberg
EFEmmanouil Flemetakis
Emmanouil Flemetakis

21 August 2015 in The Plant Cell
Verified
Journal Article
Open access
PDF file
CKChrysanthi Kalloniati
Chrysanthi Kalloniati
PKPanagiotis Krompas
Panagiotis Krompas
GKGeorgios Karalias
Georgios Karalias
MUMichael K Udvardi
Michael K Udvardi
Heinz RennenbergHeinz Rennenberg
Heinz Rennenberg
EFEmmanouil Flemetakis
Emmanouil Flemetakis
We combined transcriptomic and biochemical approaches to study rhizobial and plant sulfur (S) metabolism in nitrogen (N) fixing nodules (Fix+) of Lotus japonicus, as well as the link of S-metabolism to symbiotic nitrogen fixation and the effect of nodules on whole-plant S-partitioning and metabolism. Our data reveal that N-fixing nodules are thiol-rich organs. Their high adenosine 5′-phosphosulfate reductase activity and strong 35S-flux into cysteine and its metabolites, in combination with the transcriptional upregulation of several rhizobial and plant genes involved in S-assimilation, highlight the function of nodules as an important site of S-assimilation. The higher thiol content observed in nonsymbiotic organs of N-fixing plants in comparison to uninoculated plants could not be attributed to local biosynthesis, indicating that nodules are an important source of reduced S for the plant, which triggers whole-plant reprogramming of S-metabolism. Enhanced thiol biosynthesis in nodules and their impact on the whole-plant S-economy are dampened in plants nodulated by Fix− mutant rhizobia, which in most respects metabolically resemble uninoculated plants, indicating a strong interdependency between N-fixation and S-assimilation.

19 April 2023 in Applied Microbiology and Biotechnology
Verified
Journal Article
Open access
PDF file
DSDimitrios Skliros
Dimitrios Skliros
PPPolyxeni Papazoglou
Polyxeni Papazoglou
DGDanai Gkizi
Danai Gkizi
EPEleni Paraskevopoulou
Eleni Paraskevopoulou
Pantelis KathariosPantelis Katharios
Pantelis Katharios
EFEmmanouil Flemetakis
Emmanouil Flemetakis
The biology and biotechnology of bacteriophages have been extensively studied in recent years to explore new and environmentally friendly methods of controlling phytopathogenic bacteria. Pseudomonas syringae pv. tomato (Pst) is responsible for bacterial speck disease in tomato plants, leading to decreased yield. Disease management strategies rely on the use of copper-based pesticides. The biological control of Pst with the use of bacteriophages could be an alternative environmentally friendly approach to diminish the detrimental effects of Pst in tomato cultivations. The lytic efficacy of bacteriophages can be used in biocontrol-based disease management strategies. Here, we report the isolation and complete characterization of a bacteriophage, named Medea1, which was also tested in planta against Pst, under greenhouse conditions. The application of Medea1 as a root drenching inoculum or foliar spraying reduced 2.5- and fourfold on average, respectively, Pst symptoms in tomato plants, compared to a control group. In addition, it was observed that defense-related genes PR1b and Pin2 were upregulated in the phage-treated plants. Our research explores a new genus of Pseudomonas phages and explores its biocontrol potential against Pst, by utilizing its lytic nature and ability to trigger the immune response of plants. Key points: • Medea1 is a newly reported bacteriophage against Pseudomonas syringae pv. tomato having genomic similarities with the phiPSA1 bacteriophage • Two application strategies were reported, one by root drenching the plants with a phage-based solution and one by foliar spraying, showing up to 60- and 6-fold reduction of Pst population and disease severity in some cases, respectively, compared to control • Bacteriophage Medea1 induced the expression of the plant defense-related genes Pin2 and PR1b

30 March 2023 in Trends in Plant Science
Verified
Journal Article
Closed access
BHBin Hu
Bin Hu
EFEmmanouil Flemetakis
Emmanouil Flemetakis
ZLZhenshan Liu
Zhenshan Liu
RHRobert Hänsch
Robert Hänsch
Heinz RennenbergHeinz Rennenberg
Heinz Rennenberg