Henry C Woodruff

Dr. Henry C Woodruff

The D-Lab, Dpt of Precision Medicine, GROW– School for Oncology and Developmental Biology Maastricht University, Maastricht, The Netherlands
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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 February 2020 in British Journal of Radiology
Verified
Journal Article
Closed access
WRWilliam Rogers
William Rogers
SSSithin Thulasi Seetha
Sithin Thulasi Seetha
TRTurkey Refaee
Turkey Refaee
RLRelinde I. Y. Lieverse
Relinde I. Y. Lieverse
Renée GranzierRenée Granzier
Renée Granzier
Philippe LambinPhilippe Lambin
Philippe Lambin
Historically, medical imaging has been a qualitative or semi-quantitative modality. It is difficult to quantify what can be seen in an image, and to turn it into valuable predictive outcomes. As a result of advances in both computational hardware and machine learning algorithms, computers are making great strides in obtaining quantitative information from imaging and correlating it with outcomes. Radiomics, in its two forms “handcrafted and deep,” is an emerging field that translates medical images into quantitative data to yield biological information and enable radiologic phenotypic profiling for diagnosis, theragnosis, decision support, and monitoring. Handcrafted radiomics is a multistage process in which features based on shape, pixel intensities, and texture are extracted from radiographs. Within this review, we describe the steps: starting with quantitative imaging data, how it can be extracted, how to correlate it with clinical and biological outcomes, resulting in models that can be used to make predictions, such as survival, or for detection and classification used in diagnostics. The application of deep learning, the second arm of radiomics, and its place in the radiomics workflow is discussed, along with its advantages and disadvantages. To better illustrate the technologies being used, we provide real-world clinical applications of radiomics in oncology, showcasing research on the applications of radiomics, as well as covering its limitations and its future direction.

2 July 2020 in European Respiratory Journal
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Journal Article
Open access
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GWGuangyao Wu
Guangyao Wu
PYPei Yang
Pei Yang
YXYUANLIANG XIE
YUANLIANG XIE
Henry C WoodruffHenry C Woodruff
Henry C Woodruff
XRXiangang Rao
Xiangang Rao
Philippe LambinPhilippe Lambin
Philippe Lambin
Background: The outbreak of coronavirus disease 2019 (COVID-19) has globally strained medical resources and caused significant mortality.Objective: To develop and validate a machine-learning model based on clinical features for severity risk assessment and triage for COVID-19 patients at hospital admission.Method: 725 patients were used to train and validate the model. This included a retrospective cohort from Wuhan, China of 299 hospitalised COVID-19 patients from 23 December 2019 to 13 February 2020, and five cohorts with 426 patients from eight centres in China, Italy and Belgium from 20 February 2020 to 21 March 2020. The main outcome was the onset of severe or critical illness during hospitalisation. Model performances were quantified using the area under the receiver operating characteristic curve (AUC) and metrics derived from the confusion matrix.Results: In the retrospective cohort, the median age was 50 years and 137 (45.8%) were male. In the five test cohorts, the median age was 62 years and 236 (55.4%) were male. The model was prospectively validated on five cohorts yielding AUCs ranging from 0.84 to 0.93, with accuracies ranging from 74.4% to 87.5%, sensitivities ranging from 75.0% to 96.9%, and specificities ranging from 55.0% to 88.0%, most of which performed better than the pneumonia severity index. The cut-off values of the low-, medium- and high-risk probabilities were 0.21 and 0.80. The online calculators can be found atwww.covid19risk.ai.Conclusion: The machine-learning model, nomogram and online calculator might be useful to access the onset of severe and critical illness among COVID-19 patients and triage at hospital admission.

Verified
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SMShruti Atul Mali
Shruti Atul Mali
AIAbdalla Ibrahim
Abdalla Ibrahim
Henry C WoodruffHenry C Woodruff
Henry C Woodruff
VAVincent Andrearczyk
Vincent Andrearczyk
HMHenning Müller
Henning Müller
Philippe LambinPhilippe Lambin
Philippe Lambin
Radiomics converts medical images into mineable data via a high-throughput extraction of quantitative features used for clinical decision support. However, these radiomic features are susceptible to variation across scanners, acquisition protocols, and reconstruction settings. Various investigations have assessed the reproducibility and validation of radiomic features across these discrepancies. In this narrative review, we combine systematic keyword searches with prior domain knowledge to discuss various harmonization solutions to make the radiomic features more reproducible across various scanners and protocol settings. Different harmonization solutions are discussed and divided into two main categories: image domain and feature domain. The image domain category comprises methods such as the standardization of image acquisition, post-processing of raw sensor-level image data, data augmentation techniques, and style transfer. The feature domain category consists of methods such as the identification of reproducible features and normalization techniques such as statistical normalization, intensity harmonization, ComBat and its derivatives, and normalization using deep learning. We also reflect upon the importance of deep learning solutions for addressing variability across multi-centric radiomic studies especially using generative adversarial networks (GANs), neural style transfer (NST) techniques, or a combination of both. We cover a broader range of methods especially GANs and NST methods in more detail than previous reviews.

14 June 2022 in Nature Communications
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Journal Article
Open access
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SPSergey P. Primakov
Sergey P. Primakov
AIAbdalla Ibrahim
Abdalla Ibrahim
JTJanita E. van Timmeren
Janita E. van Timmeren
GWGuangyao Wu
Guangyao Wu
SKSimon A. Keek
Simon A. Keek
Philippe LambinPhilippe Lambin
Philippe Lambin
Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-small cell lung cancer (NSCLC) developed and validated on 1328 thoracic CT scans from 8 institutions. Along with quantitative performance detailed by image slice thickness, tumor size, image interpretation difficulty, and tumor location, we report an in-silico prospective clinical trial, where we show that the proposed method is faster and more reproducible compared to the experts. Moreover, we demonstrate that on average, radiologists & radiation oncologists preferred automatic segmentations in 56% of the cases. Additionally, we evaluate the prognostic power of the automatic contours by applying RECIST criteria and measuring the tumor volumes. Segmentations by our method stratified patients into low and high survival groups with higher significance compared to those methods based on manual contours.

18 March 2019 in Scientific Reports
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JPJurgen Peerlings
Jurgen Peerlings
Henry C WoodruffHenry C Woodruff
Henry C Woodruff
JWJessica M. Winfield
Jessica M. Winfield
AIAbdalla Ibrahim
Abdalla Ibrahim
BBBernard Van Beers
Bernard Van Beers
Philippe LambinPhilippe Lambin
Philippe Lambin
Quantitative radiomics features, extracted from medical images, characterize tumour-phenotypes and have been shown to provide prognostic value in predicting clinical outcomes. Stability of radiomics features extracted from apparent diffusion coefficient (ADC)-maps is essential for reliable correlation with the underlying pathology and its clinical applications. Within a multicentre, multi-vendor trial we established a method to analyse radiomics features from ADC-maps of ovarian (n = 12), lung (n = 19), and colorectal liver metastasis (n = 30) cancer patients who underwent repeated ( 0.85). Although some features were tissue- and/or respiratory motion-specific, 122 features were stable for all tumour-entities. A large proportion of features were stable across different vendors and field strengths. By extracting stable phenotypic features, fitting-dimensionality is reduced and reliable prognostic models can be created, paving the way for clinical implementation of ADC-based radiomics.

1 November 2020 in Radiology
Verified
Journal Article
Closed access
GWGuangyao Wu
Guangyao Wu
Henry C WoodruffHenry C Woodruff
Henry C Woodruff
JSJing Shen
Jing Shen
TRTurkey Refaee
Turkey Refaee
SSSebastian Sanduleanu
Sebastian Sanduleanu
Philippe LambinPhilippe Lambin
Philippe Lambin
CT radiomic ground-glass and solid features from part-solid nodules predicted invasiveness of lung adenocarcinoma better than conventional Brock, clinical-semantic, volumetric, and radiomics gross ... Background Solid components of part-solid nodules (PSNs) at CT are reflective of invasive adenocarcinoma, but studies describing radiomic features of PSNs and the perinodular region are lacking. Pu...