Jose Gallardo Hernanz

Mr. Jose Gallardo Hernanz

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Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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JHJose Gallardo Hernanz
Jose Gallardo Hernanz
MPMarta Perez-Illana
Marta Perez-Illana
NMNatalia Martín-González
Natalia Martín-González
CMCarmen San Martín
Carmen San Martín
Adenoviruses are large (~950 Å) and complex non-enveloped, dsDNA icosahedral viruses. They have a pseudo-T = 25 triangulation number with at least 12 different proteins composing the virion. These include the major and minor capsid proteins, core proteins, maturation protease, terminal protein, and packaging machinery. Although adenoviruses have been studied for more than 60 years, deciphering their architecture has presented a challenge for structural biology techniques. An outstanding event was the first near-atomic resolution structure of human adenovirus type 5 (HAdV-C5), solved by cryo-electron microscopy (cryo-EM) in 2010. Discovery of new adenovirus types, together with methodological advances in structural biology techniques, in particular cryo-EM, has lately produced a considerable amount of new, high-resolution data on the organization of adenoviruses belonging to different species. In spite of these advances, the organization of the non-icosahedral core is still a great unknown. Nevertheless, alternative techniques such as atomic force microscopy (AFM) are providing interesting glimpses on the role of the core proteins in genome condensation and virion stability. Here we summarize the current knowledge on adenovirus structure, with an emphasis on high-resolution structures obtained since 2010.

20 February 2020 in ACS Chemical Neuroscience
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JHJose Gallardo Hernanz
Jose Gallardo Hernanz
CECarmen Escalona-Noguero
Carmen Escalona-Noguero
BSBegoña Sot
Begoña Sot

28 May 2020 in Proceedings of the National Academy of Sciences
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MHMercedes Hernando-Pérez
Mercedes Hernando-Pérez
NMNatalia Martín-González
Natalia Martín-González
MPMarta Perez-Illana
Marta Perez-Illana
MSMaarit Suomalainen
Maarit Suomalainen
GCGabriela Nerida Condezo
Gabriela Nerida Condezo
CMCarmen San Martín
Carmen San Martín
Adenovirus minor coat protein VI contains a membrane-disrupting peptide that is inactive when VI is bound to hexon trimers. Protein VI must be released during entry to ensure endosome escape. Hexon:VI stoichiometry has been uncertain, and only fragments of VI have been identified in the virion structure. Recent findings suggest an unexpected relationship between VI and the major core protein, VII. According to the high-resolution structure of the mature virion, VI and VII may compete for the same binding site in hexon; and noninfectious human adenovirus type 5 particles assembled in the absence of VII (Ad5-VII-) are deficient in proteolytic maturation of protein VI and endosome escape. Here we show that Ad5-VII- particles are trapped in the endosome because they fail to increase VI exposure during entry. This failure was not due to increased particle stability, because capsid disruption happened at lower thermal or mechanical stress in Ad5-VII- compared to wild-type (Ad5-wt) particles. Cryoelectron microscopy difference maps indicated that VII can occupy the same binding pocket as VI in all hexon monomers, strongly arguing for binding competition. In the Ad5-VII- map, density corresponding to the immature amino-terminal region of VI indicates that in the absence of VII the lytic peptide is trapped inside the hexon cavity, and clarifies the hexon:VI stoichiometry conundrum. We propose a model where dynamic competition between proteins VI and VII for hexon binding facilitates the complete maturation of VI, and is responsible for releasing the lytic protein from the hexon cavity during entry and stepwise uncoating.


1 November 2021 in Acta Biomaterialia
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MPMarta Perez-Illana
Marta Perez-Illana
NMNatalia Martín-González
Natalia Martín-González
MHMercedes Hernando-Pérez
Mercedes Hernando-Pérez
GCGabriela Nerida Condezo
Gabriela Nerida Condezo
JHJose Gallardo Hernanz
Jose Gallardo Hernanz
PAPedro Pablo Cardenas Alzate
Pedro Pablo Cardenas Alzate
The adenovirus (AdV) icosahedral capsid encloses a nucleoprotein core formed by the dsDNA genome bound to numerous copies of virus-encoded, positively charged proteins. For an efficient delivery of its genome, AdV must undergo a cascade of dismantling events from the plasma membrane to the nuclear pore. Throughout this uncoating process, the virion moves across potentially disruptive environments whose influence in particle stability is poorly understood. In this work we analyze the effect of acidic conditions on AdV particles by exploring their mechanical properties, genome accessibility and capsid disruption. Our results show that under short term acidification the AdV virion becomes softer and its genome less accessible to an intercalating dye, even in the presence of capsid openings. The AFM tip penetrates deeper in virions at neutral pH, and mechanical properties of genome-less particles are not altered upon acidification. Altogether, these results indicate that the main effect of acidification is the compaction of the nucleoproteic core, revealing a previously unknown role for chemical cues in AdV uncoating. STATEMENT OF SIGNIFICANCE: Studying the behavior of virus particles under changing environmental conditions is key to understand cell entry and propagation. One such change is the acidification undergone in certain cell compartments, which is thought to play a role in the programmed uncoating of virus genomes. Mild acidification in the early endosome has been proposed as a trigger signal for human AdV uncoating. However, the actual effect of low pH in AdV stability and entry is not well defined. Understanding the consequences of acidification in AdV structure and stability is also relevant to define storage conditions for therapeutic vectors, or design AdV variants resistant to intestinal conditions for oral administration of vaccines.

29 July 2011 in SSRN Electronic Journal
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JHJose Gallardo Hernanz
Jose Gallardo Hernanz
Spanish La síntesis de audio es uno de los procesos por los cuales es posible la creación y representación de una sensación acústica deseada. A su vez, los instrumentos musicales acústicos, es decir, los que generan el sonido de manera mecánica sin involucrar un impulso eléctrico, buscan representar una organización de sonidos deseados, lo que comúnmente denominamos música. Tanto la composición musical como la síntesis de audio son procesos que permiten expresar a través de un medio –el sonido– una sensación deseada. El presente artículo tiene como finalidad establecer un estado del arte donde se relacionen la composición musical, las técnicas expandidas de instrumentación y la síntesis como procesos creativos correlacionados entre sí por un factor en común: el timbre. English The audio synthesis is one of the processes by which it is possible the creation and representation of a desired acoustic sensation. In turn, acoustic musical instruments i.e. those that generate sound mechanically without involving an electrical impulse, an organization seeking to represent the sounds you want, what we commonly call music. Both the musical composition and audio synthesis are process where concerns through sound half-a-desired sensation.This article aims to establish a state of the art which relates the musical composition, techniques and instrumentation expanded, the creative process and synthesis as correlated together by a common factor: the timbre