Saila Karhu

Dr. Saila Karhu

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 August 2022 in The Plant Journal
Verified
Journal Article
Open access
ESElisa Senger
Elisa Senger
Sonia OsorioSonia Osorio
Sonia Osorio
KOKlaus Olbricht
Klaus Olbricht
PSPaul Shaw
Paul Shaw
BDBéatrice Denoyes
Béatrice Denoyes
Bruno MezzettiBruno Mezzetti
Bruno Mezzetti
SUMMARY: Fresh berries are a popular and important component of the human diet. The demand for high‐quality berries and sustainable production methods is increasing globally, challenging breeders to develop modern berry cultivars that fulfill all desired characteristics. Since 1994, research projects have characterized genetic resources, developed modern tools for high‐throughput screening, and published data in publicly available repositories. However, the key findings of different disciplines are rarely linked together, and only a limited range of traits and genotypes has been investigated. The Horizon2020 project BreedingValue will address these challenges by studying a broader panel of strawberry, raspberry and blueberry genotypes in detail, in order to recover the lost genetic diversity that has limited the aroma and flavor intensity of recent cultivars. We will combine metabolic analysis with sensory panel tests and surveys to identify the key components of taste, flavor and aroma in berries across Europe, leading to a high‐resolution map of quality requirements for future berry cultivars. Traits linked to berry yields and the effect of environmental stress will be investigated using modern image analysis methods and modeling. We will also use genetic analysis to determine the genetic basis of complex traits for the development and optimization of modern breeding technologies, such as molecular marker arrays, genomic selection and genome‐wide association studies. Finally, the results, raw data and metadata will be made publicly available on the open platform Germinate in order to meet FAIR data principles and provide the basis for sustainable research in the future.

1 September 2021 in LWT
Verified
Journal Article
Closed access
WYWei Yang
Wei Yang
SLShuxun Liu
Shuxun Liu
AMAlexis Marsol-Vall
Alexis Marsol-Vall
RTRoni Tähti
Roni Tähti
Oskar LaaksonenOskar Laaksonen
Oskar Laaksonen
XMXueying Ma
Xueying Ma

18 July 2024 in Physiologia Plantarum
Verified
Journal Article
Open access
ARAttiq ur Rehman
Attiq ur Rehman
TITerhi Iso-Touru
Terhi Iso-Touru
JJJakob Junkers
Jakob Junkers
MRMarja Rantanen
Marja Rantanen
SKSaila Karhu
Saila Karhu
THTuuli Haikonen
Tuuli Haikonen
The cultivated garden strawberry (Fragaria × ananassa) has a rich history, originating from the hybridization of two wild octoploid strawberry species in the 18th century. Two‐step reconstruction of Fragaria × ananassa through controlled crossings between pre‐improved selections of its parental species is a promising approach for enriching the breeding germplasm of strawberry for wider adaptability. We created a population of reconstructed strawberry by hybridizing elite selections of F. virginiana and F. chiloensis. A replicated field experiment was conducted to evaluate the population's performance for eleven horticulturally important traits, over multiple years. Population structure analyses based on Fana‐50 k SNP array data confirmed pedigree‐based grouping of the progenies into four distinct groups. As complex traits are often influenced by environmental variables, and population structure can lead to spurious associations, we tested multiple genome‐wide association study (GWAS) models. GWAS uncovered 39 quantitative trait loci (QTL) regions for eight traits distributed across twenty chromosomes, including 11 consistent and 28 putative QTLs. Candidate genes for traits including winter survival, flowering time, runnering vigor, and hermaphrodism were identified within the QTL regions. To our knowledge, this study marks the first comprehensive investigation of adaptive and horticultural traits in a large, multi‐familial reconstructed strawberry population using SNP markers.

10 July 2021 in Plants
Verified
Journal Article
Open access
PDF file
SRSaija Rantala
Saija Rantala
JKJanne Kaseva
Janne Kaseva
ANAnna Nukari
Anna Nukari
JLJaana Laamanen
Jaana Laamanen
MVMerja Veteläinen
Merja Veteläinen
SKSaila Karhu
Saila Karhu
The cryopreservation of dormant buds can be a feasible method for preserving germplasm of cold-tolerant woody plants. In the present study, we evaluated the effects of pre-desiccation, thawing method, and the rehydration of bud sections on the post-cryopreservation recovery of dormant blackcurrant buds in vitro. The estimated recovery of small- and medium-sized buds was 80.1 and 62.7% respectively for desiccated buds and 67.8 and 72.3% respectively for non-desiccated buds. The pre-desiccation of bud sections enhanced the number of the shoots regenerated from vegetative buds (2.3 vs. 4.7). The estimated recovery of fast-thawed buds was better after 14-day than after 7-day rehydration (85 vs. 59%). In slowly thawed buds the difference between 14-day and 7-day rehydration was not significant (73 vs. 62%). The estimated recovery of vegetative and flower buds was 77.7 and 41.1% respectively after 7-day rehydration, and 95.2 and 43.6% respectively after a 14-day rehydration period. The rehydration of bud sections was not necessary for the in vitro recovery of non-desiccated, fast-thawed buds. Of the 23 blackcurrant cultivars cryopreserved using non-desiccated dormant buds collected from a greenhouse, the estimated recovery of 22 cultivars ranged between 42 and 90%.

21 December 2022 in LWT
Verified
Journal Article
Open access
Ye TianYe Tian
Ye Tian
SKSaila Karhu
Saila Karhu
MVMika Virtanen
Mika Virtanen
KLKaisa Linderborg
Kaisa Linderborg
Baoru YangBaoru Yang
Baoru Yang
Oskar LaaksonenOskar Laaksonen
Oskar Laaksonen

28 January 2023 in Agriculture
Verified
Journal Article
Open access
PDF file
NLNico Lippi
Nico Lippi
ESElisa Senger
Elisa Senger
SKSaila Karhu
Saila Karhu
Bruno MezzettiBruno Mezzetti
Bruno Mezzetti
MCMARTA CIANCIABELLA
MARTA CIANCIABELLA
CMCHIARA MEDORO
CHIARA MEDORO
A comprehensive lexicon is a necessary communication tool between the panel leader and panelists to describe each sensory stimulus potentially evoked by a product. In the current scientific breeding and trading scenario, a multilingual sensory lexicon is necessary to ensure the consistency of sensory evaluations when tests are conducted across countries and/or with international panelists. This study aimed to develop a reference multilingual lexicon for raspberry (Rubus idaeus L.) and blueberry (Vaccinium corymbosum L.) to perform comparative sensory tests through panels operating in different countries using their native language. Attributes were collected from state-of-the-art literature and integrated with a detailed description of the sensory stimulus associated with each term. A panel of sensory judges was trained to test lexicon efficacy. After training, panelists evaluated three cultivars of blueberry and raspberry through RATA (Rate All That Apply), which allowed missing attributes to be excluded while rating those actually present. Results showed the discerning efficacy of the lexicon developed can be a valuable tool for planning sensory evaluations held in different countries, opening up further possibilities to enrich blueberry and raspberry descriptor lists with emerging terms from local experience and evaluations of berry genotypes with peculiar traits.