Department of Biomedical Sciences and Biomedical Engineering, Faculty of Medicine, Prince of Songkla University, Hatyai Campus, Songkhla 90110, Thailand.
Dr. Sitthichok Chaichulee
Department of Biomedical Sciences and Biomedical Engineering, Faculty of Medicine, Prince of Songkla University, Hatyai Campus, Songkhla 90110, Thailand.
The implementation of video-based non-contact technologies to monitor the vital signs of preterm infants in the hospital presents several challenges, such as the detection of the presence or the absence of a patient in the video frame, robustness to changes in lighting conditions, automated identification of suitable time periods and regions of interest from which vital signs can be estimated. We carried out a clinical study to evaluate the accuracy and the proportion of time that heart rate and respiratory rate can be estimated from preterm infants using only a video camera in a clinical environment, without interfering with regular patient care. A total of 426.6 h of video and reference vital signs were recorded for 90 sessions from 30 preterm infants in the Neonatal Intensive Care Unit (NICU) of the John Radcliffe Hospital in Oxford. Each preterm infant was recorded under regular ambient light during daytime for up to four consecutive days. We developed multi-task deep learning algorithms to automatically segment skin areas and to estimate vital signs only when the infant was present in the field of view of the video camera and no clinical interventions were undertaken. We propose signal quality assessment algorithms for both heart rate and respiratory rate to discriminate between clinically acceptable and noisy signals. The mean absolute error between the reference and camera-derived heart rates was 2.3 beats/min for over 76% of the time for which the reference and camera data were valid. The mean absolute error between the reference and camera-derived respiratory rate was 3.5 breaths/min for over 82% of the time. Accurate estimates of heart rate and respiratory rate could be derived for at least 90% of the time, if gaps of up to 30 seconds with no estimates were allowed.
Wound assessment is essential for evaluating wound healing. One cornerstone of wound care practice is the use of clinical guidelines that mandate regular documentation, including wound size and wound tissue composition, to determine the rate of wound healing. The traditional method requires wound care professionals to manually measure the wound area and tissue composition, which is time-consuming, costly, and difficult to reproduce. In this work, we propose an approach for automatic wound assessment that incorporates automatic color and measurement calibration and artificial intelligence algorithms. Our approach enables the comparison of images taken at different times, even if they were taken under different lighting conditions, distances, lenses, and camera sensors. We designed a calibration chart and developed automatic algorithms for color and measurement calibration. The wound area and wound composition on the images were annotated by three physicians with more than ten years of experience. Deep learning models were then developed to mimic what the physicians did on the images. We examined two network variants, U-Net with EfficientNet and U-Net with MobileNetV2, on wound images with a size of 1024 × 1024 pixels. Our best-performing algorithm achieved a mean intersection over union (IoU) of 0.6964, 0.3957, 0.6421, and 0.1552 for segmenting a wound area, epithelialization area, granulation tissue, and necrotic tissue, respectively. Our approach was able to accurately segment the wound area and granulation tissue but was inconsistent with respect to the epithelialization area and necrotic tissue. The calibration chart, which helps calibrate colors and scales, improved the performance of the algorithm. The approach could provide a thorough assessment of the wound, which could help clinicians tailor treatment to the patient’s condition.
Non-contact vital sign monitoring enables the estimation of vital signs, such as heart rate, respiratory rate and oxygen saturation (SpO2), by measuring subtle color changes on the skin surface using a video camera. For patients in a hospital ward, the main challenges in the development of continuous and robust non-contact monitoring techniques are the identification of time periods and the segmentation of skin regions of interest (ROIs) from which vital signs can be estimated. We propose a deep learning framework to tackle these challenges. Approach: This paper presents two convolutional neural network (CNN) models. The first network was designed for detecting the presence of a patient and segmenting the patient’s skin area. The second network combined the output from the first network with optical flow for identifying time periods of clinical intervention so that these periods can be excluded from the estimation of vital signs. Both networks were trained using video recordings from a clinical study involving 15 pre-term infants conducted in the high dependency area of the neonatal intensive care unit (NICU) of the John Radcliffe Hospital in Oxford, UK. Main results: Our proposed methods achieved an accuracy of 98.8% for patient detection, a mean intersection-over-union (IOU) score of 88.6% for skin segmentation and an accuracy of 94.5% for clinical intervention detection using two-fold cross validation. Our deep learning models produced accurate results and were robust to different skin tones, changes in light conditions, pose variations and different clinical interventions by medical staff and family visitors. Significance: Our approach allows cardio-respiratory signals to be continuously derived from the patient’s skin during which the patient is present and no clinical intervention is undertaken.
Patient detection and skin segmentation are important steps in non-contact vital sign monitoring as skin regions contain pulsatile information required for the estimation of vital signs such as heart rate, respiratory rate and peripheral oxygen saturation (SpO2). Previous methods based on face detection or colour-based image segmentation are less reliable in a hospital setting. In this paper, we develop a multi-task convolutional neural network (CNN) for detecting the presence of a patient and segmenting the patient's skin regions. The multi-task model has a shared core network with two branches: a segmentation branch which was implemented using a fully convolutional network, and a classification branch which was implemented using global average pooling. The whole network was trained using images from a clinical study conducted in the neonatal intensive care unit (NICU) of the John Radcliffe hospital, Oxford, UK. Our model can produce accurate results and is robust to changes in different skin tones, pose variations, lighting variations, and routine interaction of clinical staff.
An abnormal respiratory rhythm is an early indicator of physiological deterioration. It is of critical importance in the clinical management of critically-ill or premature infants, for whom apnoea of prematurity is a major concern. Nevertheless, respiratory signals are still largely disregarded in neonatal intensive care units due to the high prevalence of noise and high false alarm rates in conventional monitoring. To address this, we present a novel method for the extraction of respiration from camera-based measurements taken from the top-view of an incubator. A total of 107 events from 30 neonatal admissions were annotated by three clinical reviewers as either true cessations of breathing (physiologically relevant) or false (artefact-related). The events were divided into two independent groups for training and validation and our algorithm was trained to classify true cessations. We achieved a good classification performance with 9 out of 10 cessations and 7 out of 10 artefactual events correctly identified in the training set, and with 7 out of 10 cessations and 34 out of 44 artefactual events correctly identified in the out-of-sample test set. A reduction in false alarm rate of 77.3% was achieved.
Allergic reactions to medication range from mild to severe or even life-threatening. Proper documentation of patient allergy information is critical for safe prescription, avoiding drug interactions, and reducing healthcare costs. Allergy information is regularly obtained during the medical interview, but is often poorly documented in electronic health records (EHRs). While many EHRs allow for structured adverse drug reaction (ADR) reporting, a free-text entry is still common. The resulting information is neither interoperable nor easily reusable for other applications, such as clinical decision support systems and prescription alerts. Current approaches require pharmacists to review and code ADRs documented by healthcare professionals. Recently, the effectiveness of machine algorithms in natural language processing (NLP) has been widely demonstrated. Our study aims to develop and evaluate different NLP algorithms that can encode unstructured ADRs stored in EHRs into institutional symptom terms. Our dataset consists of 79,712 pharmacist-reviewed drug allergy records. We evaluated three NLP techniques: Naive Bayes—Support Vector Machine (NB-SVM), Universal Language Model Fine-tuning (ULMFiT), and Bidirectional Encoder Representations from Transformers (BERT). We tested different general-domain pre-trained BERT models, including mBERT, XLM-RoBERTa, and WanchanBERTa, as well as our domain-specific AllergyRoBERTa, which was pre-trained from scratch on our corpus. Overall, BERT models had the highest performance. NB-SVM outperformed ULMFiT and BERT for several symptom terms that are not frequently coded. The ensemble model achieved an exact match ratio of 95.33%, a F1score of 98.88%, and a mean average precision of 97.07% for the 36 most frequently coded symptom terms. The model was then further developed into a symptom term suggestion system and achieved a Krippendorff’s alpha agreement coefficient of 0.7081 in prospective testing with pharmacists. Some degree of automation could both accelerate the availability of allergy information and reduce the efforts for human coding.