Rafał Tarakowski

Dr. Rafał Tarakowski

orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 December 2020 in Molecules
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Journal Article
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JLJérémie Loulier
Jérémie Loulier
François LefortFrançois Lefort
François Lefort
MSMarcin Stocki
Marcin Stocki
MAMonika Asztemborska
Monika Asztemborska
RSRafal Szmigielski
Rafal Szmigielski
JNJustyna Nowakowska
Justyna Nowakowska
Fungi and oomycetes release volatiles into their environment which could be used for olfactory detection and identification of these organisms by electronic-nose (e-nose). The aim of this study was to survey volatile compound emission using an e-nose device and to identify released molecules through solid phase microextraction–gas chromatography/mass spectrometry (SPME–GC/MS) analysis to ultimately develop a detection system for fungi and fungi-like organisms. To this end, cultures of eight fungi (Armillaria gallica, Armillaria ostoyae, Fusarium avenaceum, Fusarium culmorum, Fusarium oxysporum, Fusarium poae, Rhizoctonia solani, Trichoderma asperellum) and four oomycetes (Phytophthora cactorum, P. cinnamomi, P. plurivora, P. ramorum) were tested with the e-nose system and investigated by means of SPME-GC/MS. Strains of F. poae, R. solani and T. asperellum appeared to be the most odoriferous. All investigated fungal species (except R. solani) produced sesquiterpenes in variable amounts, in contrast to the tested oomycetes strains. Other molecules such as aliphatic hydrocarbons, alcohols, aldehydes, esters and benzene derivatives were found in all samples. The results suggested that the major differences between respective VOC emission ranges of the tested species lie in sesquiterpene production, with fungi emitting some while oomycetes released none or smaller amounts of such molecules. Our e-nose system could discriminate between the odors emitted by P. ramorum, F. poae, T. asperellum and R. solani, which accounted for over 88% of the PCA variance. These preliminary results of fungal and oomycete detection make the e-nose device suitable for further sensor design as a potential tool for forest managers, other plant managers, as well as regulatory agencies such as quarantine services.

23 June 2020 in Sensors
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Journal Article
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Piotr BorowikPiotr Borowik
Piotr Borowik
LALeszek Adamowicz
Leszek Adamowicz
RTRafał Tarakowski
Rafał Tarakowski
KSKrzysztof Siwek
Krzysztof Siwek
TGTomasz Grzywacz
Tomasz Grzywacz
Recent advances in the field of electronic noses (e-noses) have led to new developments in both sensors and feature extraction as well as data processing techniques, providing an increased amount of information. Therefore, feature selection has become essential in the development of e-nose applications. Sophisticated computation techniques can be applied for solving the old problem of sensor number optimization and feature selections. In this way, one can find an optimal application-specific sensor array and reduce the potential cost associated with designing new e-nose devices. In this paper, we examine a procedure to extract and select modeling features for optimal e-nose performance. The usefulness of this approach is demonstrated in detail. We calculated the model’s performance using cross-validation with the standard leave-one-group-out and group shuffle validation methods. Our analysis of wine spoilage data from the sensor array shows when a transient sensor response is considered, both from gas adsorption and desorption phases, it is possible to obtain a reasonable level of odor detection even with data coming from a single sensor. This requires adequate extraction of modeling features and then selection of features used in the final model.

13 February 2021 in Sensors
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Piotr BorowikPiotr Borowik
Piotr Borowik
LALeszek Adamowicz
Leszek Adamowicz
RTRafał Tarakowski
Rafał Tarakowski
PWPrzemysław Wacławik
Przemysław Wacławik
Tomasz Krzysztof OszakoTomasz Krzysztof Oszako
Tomasz Krzysztof Oszako
Miłosz TkaczykMiłosz Tkaczyk
Miłosz Tkaczyk
Compared with traditional gas chromatography–mass spectrometry techniques, electronic noses are non-invasive and can be a rapid, cost-effective option for several applications. This paper presents comparative studies of differentiation between odors emitted by two forest pathogens: Pythium and Phytophthora, measured by a low-cost electronic nose. The electronic nose applies six non-specific Figaro Inc. metal oxide sensors. Various features describing shapes of the measurement curves of sensors’ response to the odors’ exposure were extracted and used for building the classification models. As a machine learning algorithm for classification, we use the Support Vector Machine (SVM) method and various measures to assess classification models’ performance. Differentiation between Phytophthora and Pythium species has an important practical aspect allowing forest practitioners to take appropriate plant protection. We demonstrate the possibility to recognize and differentiate between the two mentioned species with acceptable accuracy by our low-cost electronic nose.

31 August 2021 in Sensors
Verified
Journal Article
Open access
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Piotr BorowikPiotr Borowik
Piotr Borowik
LALeszek Adamowicz
Leszek Adamowicz
RTRafał Tarakowski
Rafał Tarakowski
PWPrzemysław Wacławik
Przemysław Wacławik
Tomasz Krzysztof OszakoTomasz Krzysztof Oszako
Tomasz Krzysztof Oszako
Miłosz TkaczykMiłosz Tkaczyk
Miłosz Tkaczyk
Electronic noses can be applied as a rapid, cost-effective option for several applications. This paper presents the results of measurements of samples of two pathogenic fungi, Fusarium oxysporum and Rhizoctonia solani, performed using two constructions of a low-cost electronic nose. The first electronic nose used six non-specific Figaro Inc. metal oxide gas sensors. The second one used ten sensors from only two models (TGS 2602 and TGS 2603) operating at different heater voltages. Sets of features describing the shapes of the measurement curves of the sensors’ responses when exposed to the odours were extracted. Machine learning classification models using the logistic regression method were created. We demonstrated the possibility of applying the low-cost electronic nose data to differentiate between the two studied species of fungi with acceptable accuracy. Improved classification performance could be obtained, mainly for measurements using TGS 2603 sensors operating at different voltage conditions.

1 February 2014 in Journal of Food Engineering
Verified
Journal Article
Closed access
RTRafał Tarakowski
Rafał Tarakowski
AMA. Malanowski
A. Malanowski
RKR. Kościesza
R. Kościesza
RSR.M. Siegoczyński
R.M. Siegoczyński

12 March 2013 in Journal of the American Oil Chemists' Society
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Journal Article
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ARA. J. Rostocki
A. J. Rostocki
RTRafał Tarakowski
Rafał Tarakowski
PKPiotr Kielczynski
Piotr Kielczynski
MSM. Szalewski
M. Szalewski
ABA. Balcerzak
A. Balcerzak
SPS. Ptasznik
S. Ptasznik
This paper presents measurements of sound velocity and attenuation in olive oil, with known chemical composition, as a function of pressure, within the range of pressure up to 0.7 GPa. Dependencies of sound velocity, relative ultrasonic wave attenuation, volume, and adiabatic compressibility on pressure show discontinuities. This proves the existence of the first order phase transition in olive oil (liquid to solid‐like phase transition). Rapid and large changes in relative attenuation testify to the existence of a phase transition in olive oil. Moreover, the kinetics of phase transition was also investigated. Measurement of acoustic wave velocity and relative attenuation in olive oil during the phase transition and in the high‐pressure phase is a novelty. The results obtained can be useful in the development of new methods in food (edible oils) control, processing, and preservation.