Previous studies on the polymerization of 3’,5’ cyclic guanosine monophosphate (cGMP) demonstrated the potential of the compound in the abiotic generation of the first oligonucleotide sequences on the early Earth. These experiments were conducted under idealized laboratory conditions, which logically raises the question whether the same chemistry could take place in the harsh environment present on our planet in its earliest days. In the current study, we focus on the mineralogical context of this chemistry and show that numerous, but not all, common minerals assumed to be present on the early Earth could host the polymerization of H‐form 3’,5’ cGMP. In particular, we have found that quartz varieties are especially suitable for this purpose, similar to andalusite, amphibole or micas. On the contrary, olivine, calcite, and serpentine‐group minerals interfere with the studied polymerization chemistry. Our results show that crystallization on mineral surfaces, which is mainly a diffusion controlled process, determines the ability of 3’,5’ cGMP to polymerize. The observation that numerous amorphous and crystalline SiO 2 forms are compatible with the oligomerization chemistry suggests that the process could commonly occur in a wide range of primordial environments allowing for crystallization of the cyclic monomers from a dropping solution.
Template-free nonenzymatic polymerization of 3′,5′ cyclic nucleotides is an emerging topic of the origin of life research. In the last ten years, a number of papers have been published addressing various aspects of this process. These works evoked a vivid discussion among scientists working in the field of prebiotic chemistry. The aim of the current review is to answer the most frequently raised questions related to the detection and characterization of oligomeric products as well as to the geological context of this chemistry.
The ongoing exploration of planets such as Mars is producing a wealth of data to define habitable environments beyond the Earth. The inferred presence of neutral to alkaline aqueous fluids on Mars in its early history suggests that many potentially habitable environments existed on the planet. Terrestrial analogues with similar chemical and physical properties are being explored and characterized in order to assess their suitability for triggering the Origin of Life on Mars. Recently, a novel Mars analogue site has been identified in the Bagno dell’Acqua Lake, which is located in the island of Pantelleria in Sicily (Italy). We report here that microbialite from the Bagno dell’Acqua Lake acts as an efficient catalyst for prebiotic processes, starting from a ternary mixture of well-recognized chemical precursors, including ammonium formate, diaminomalonitrile, and alpha-amino acids. Under thermal conditions, significant amounts of building blocks of both RNA and PNA were obtained. Furthermore, samples of the water from the Bagno dell’Acqua Lake have been found to promote the polymerization of the H-form of 3′,5′-cyclic GMP, resulting in the generation of RNA oligomers of up to 15 units in length.
The front cover artwork is provided by Judit Šponer (Institute of Biophysics, Czech Academy of Sciences). The image shows that polymerization of H‐form 3’,5’ cyclic guanosine monophosphate (GMP) exhibits an oscillatory behavior when studying the reaction on longer time scales (of several days). Domains of the material, differing in the level of hydration, interlock like pieces of a puzzle, resulting in a complex chemical system working far from equilibrium. Read the full text of the Article at 10.1002/syst.202000011 .
Plant Parasitic Nematodes (PPNs) are a major problem in agriculture. Damage caused by PPNs has been estimated at USD 80–157 billion annually. The estimates could be even worse in the future in the context of a growing world population in a climate change scenario and with the removal/reduction in the use of some nematodicides due to the strong ecological impact. Biocontrol Agents (BCAs) currently constitute only 8.8% of the general pesticide market. With a view to an ecological transition, the transition from pesticides to biopesticides represents an important challenge that appears necessary not only for organic farming, but also in so-called integrated agriculture. Among the possible BCAs, microorganisms, and in particular yeast, which enjoys the GRAS (Generally Recognized As Safe) status, have the advantage of being able to be produced on a large scale by fermentation on waste substrates at low cost. In this paper, as proof of concept we constructed yeast strains expressing short hairpin RNAs (shRNAs) targeting the daf-16 gene in C. elegans. We demonstrate that oral ingestion of yeast cells expressing DAF16 shRNA is efficient in lowering daf-16 expression and lifespan, suggesting a sustainable RNA interference-based strategy to inhibit the development of PPNs.