The coevolution of mycorrhizae with plants represents a major evolutionary adaptation to the land environment. As a bioinoculant, arbuscular mycorrhizal fungi (AMF) play a beneficial role in sustainable agriculture by symbiotically associating with many crop plants. In this review, we primarily focus on the nutritional and non-nutritional functionality of AMF in soil and plant productivity. AMF maintain soil quality and health via three aspects: soil structure, plant physiology, and ecological interactions. These lead plants to increase their functionality, further growth, and productivity. The formation of soil aggregates via glomalin production maintains the soil structure. Physiologically, AMF change nutrient acquisition and thereby increase soil fertility and productivity. Biotic (pathogens and weed plants) and abiotic (salinity, drought, extreme temperature, soil pH, and heavy metals) stress alleviation is also achieved via altering a plant’s physiological status. By serving as a biocontrol agent, AMF negatively interact with plant pathogens. As a result of beneficial interactions with other rhizosphere microorganisms and above-ground organisms, AMF induce a synergistic effect on plant performance. Moreover, they are also involved in land restoration and seedling establishment. The collective effect of all these functions positively influences overall plant performance and productivity.

Phytopathogenic Ganoderma species pose a significant threat to global plant health, resulting in estimated annual economic losses exceeding USD (US Dollars) 68 billion in the agriculture and forestry sectors worldwide. To combat this pervasive menace effectively, a comprehensive understanding of the biology, ecology, and plant infection mechanisms of these pathogens is imperative. This comprehensive review critically examines various aspects of Ganoderma spp., including their intricate life cycle, their disease mechanisms, and the multifaceted environmental factors influencing their spread. Recent studies have quantified the economic impact of Ganoderma infections, revealing staggering yield losses ranging from 20% to 80% across various crops. In particular, oil palm plantations suffer devastating losses, with an estimated annual reduction in yield exceeding 50 million metric tons. Moreover, this review elucidates the dynamic interactions between Ganoderma and host plants, delineating the pathogen’s colonization strategies and its elicitation of intricate plant defense responses. This comprehensive analysis underscores the imperative for adopting an integrated approach to Ganoderma disease management. By synergistically harnessing cultural practices, biological control, and chemical treatments and by deploying resistant plant varieties, substantial strides can be made in mitigating Ganoderma infestations. Furthermore, a collaborative effort involving scientists, breeders, and growers is paramount in the development and implementation of sustainable strategies against this pernicious plant pathogen. Through rigorous scientific inquiry and evidence-based practices, we can strive towards safeguarding global plant health and mitigating the dire economic consequences inflicted by Ganoderma infections.

Endophytic microbes are a ubiquitous group of plant-associated communities that colonize the intercellular or intracellular host tissues while providing numerous beneficial effects to the plants. All the plant species are thought to be associated with endophytes, majorly constituted with bacteria and fungi. During the last two decades, there has been a considerable movement toward the study of endophytes associated with coffee plants. In this review, the main consideration is given to address the coffee-associated endophytic bacteria and fungi, particularly their action on plant growth promotion and the biocontrol of pests. In addition, we sought to identify and analyze the gaps in the available research. Additionally, the potential of endophytes to improve the quality of coffee seeds is briefly discussed. Even though there are limited studies on the subject, the potentiality of coffee endophytes in plant growth promotion through enhancing nitrogen fixation, availability of minerals, nutrient absorption, secretion of phytohormones, and other bioactive metabolites has been well recognized. Further, the antagonistic effect against various coffee pathogenic bacteria, fungi, nematodes, and also insect pests leads to the protection of the crop. Furthermore, it is recognized that endophytes enhance the sensory characteristics of coffee as a new field of study.

As phosphorus (P) bioavailability is limited in arable lands, chemical fertilizers are being used by farmers to increase crop production. Phosphate-solubilizing microorganisms (PSMs) increase the bioavailability of sparingly soluble inorganic and organic soil phosphorus. Therefore, the current study was an effort to evaluate the phosphate-solubilizing efficiency of PSMs using tricalcium phosphate (TCP) and Eppawala rock phosphate (ERP). The efficiency of phosphate solubilization by a series of identified isolates was compared using TCP (5 g L⁻¹) and ERP (5 g L⁻¹) as a P source in Pikovskava’s broth. Twelve microbial isolates that showed a higher efficiency in phosphate solubilization were selected for the production of the biofertilizer. The isolate F10 in ERP broth was characterized by the highest significant level of available phosphorus (896.98 ± 10.41) mg L⁻¹, followed by F5 (Aspergillus sp.) in TCP broth 991.43 ± 1.37 mg L⁻¹. A pot trial was carried out by using Capsicum annuum L. as the test plant in two soil conditions: sterilized soil and non-sterilized soil with six treatments and four replicates. The significantly highest plant height, leaf length, and width were shown by chili plants treated with the formulated biofertilizer. Therefore, the application of native PSMs appeared to be an efficient method of solubilizing sparingly soluble P compounds into plant-available forms.

Huanglongbing (HLB) pathogen Candidatus Liberibacter asiaticus (CLas) brings a great concern about the phloem nutrient transport in diseased plants. There is an urgent need to find the best management strategies to reduce the losses in the citrus industry worldwide. Endophytic bacteria are negatively affected by CLas pathogen, and these endophytes are associated with improved availability of nutrients and pathogen resistance. This study underpins the relationship between CLas pathogen, endophyte population and nutrients availability in citrus plants. The citrus plants were treated with Bacillus subtilis L1-21 and Hoagland solution to find out synergism efficacy to mitigate citrus HLB. We showed that citrus shoots in the presence of 50% Hoagland solution displayed maximum number of endophytes with 6.28 × 10³ to 3.04 × 10⁵ CFU/g. Among 50 candidate strains, B. subtilis L1-21 emerged as potential antagonist against surrogate strain Xanthomonas citri subsp. citri. The citrus half-leaf method identified that application of endophyte L1-21 with 50% Hoagland solution successfully reduces the CLas abundance. We point out that this combination results in a higher number of endophytes population with 2.52 × 10⁴ to 9.11 × 10⁶ CFU/g after 60 days, and reduces CLas pathogen abundance in asymptomatic HLB plants. In HLB symptomatic citrus plants, B. subtilis L1-21 potentially increases the endophyte population from 1.11 × 10⁴ to 5.26 × 10⁷ CFU/g in the presence of Hoagland solution, and pathogen abundance was reduced from 9.51 × 10⁵ to 1.06 × 10⁴ copies/g. Altogether, we suggested that the presence of endophyte L1-21 with Hoagland solution is more effective in HLB asymptomatic citrus plants, but a slight reduction of pathogen was observed in symptomatic plants. The findings revealed the role of indigenous citrus endophyte B. subtilis L1-21 along with other nutrients in the reduction of CLas pathogen abundance inside symptomatic and asymptomatic plants in citrus endophyte–nutrient–pathogen interplay.

This study assessed the potential uptake of soil-contaminated heavy metals by Azolla pinnata and Lemna gibba in combination with and without arbuscular mycorrhizal fungi (AMF) in traditional and improved rice varieties. Total levels of cadmium (Cd), lead (Pb), mercury (Hg), and arsenic (As) in soil, rice roots, shoots, grains, A. pinnata, and L. gibba were estimated using ICP-MS. The percentage colonization in AMF-inoculated and AMF-uninoculated rice varied from 1.13–30.67% and 1.33–5.42%, respectively. These findings suggested that AMF provide protection to rice plants against the combined toxicity of Cd, As, Pb, and Hg in rice field soil. The combined interaction of AMF, organic fertilizer, and A. pinnata decreased heavy metal accumulation in rice roots, shoots, and grains in both tested varieties. The intake and subsequent accumulation of Cd, As, Pb, and Hg in the rice grains differed significantly (p < 0.05) between the two rice varieties. Furthermore, it was revealed that the AMF-inoculated rice plants reduced the translocation of heavy metals from root to shoot. Therefore, it can be concluded that heavy metal absorption and accumulation in rice can be reduced by the application of AMF, organic fertilizer, and A. pinnata together in rice farming.