Davor Nestić

Dr. Davor Nestić

Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia
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Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 September 2021 in Pharmaceutics
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Journal Article
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Davor NestićDavor Nestić
Davor Nestić
Ksenija BožinovićKsenija Božinović
Ksenija Božinović
Isabela Pehar DraškovićIsabela Pehar Drašković
Isabela Pehar Drašković
RWRebecca Wallace
Rebecca Wallace
Alan ParkerAlan Parker
Alan Parker
DMDragomira Majhen
Dragomira Majhen
Adenoviruses represent exceptional candidates for wide-ranging therapeutic applications, from vectors for gene therapy to oncolytics for cancer treatments. The first ever commercial gene therapy medicine was based on a recombinant adenovirus vector, while most recently, adenoviral vectors have proven critical as vaccine platforms in effectively controlling the global coronavirus pandemic. Here, we discuss factors involved in adenovirus cell binding, entry, and trafficking; how they influence efficiency of adenovirus-based vectors; and how they can be manipulated to enhance efficacy of genetically modified adenoviral variants. We focus particularly on endocytosis and how different adenovirus serotypes employ different endocytic pathways to gain cell entry, and thus, have different intracellular trafficking pathways that subsequently trigger different host antiviral responses. In the context of gene therapy, the final goal of the adenovirus vector is to efficiently deliver therapeutic transgenes into the target cell nucleus, thus allowing its functional expression. Aberrant or inefficient endocytosis can impede this goal, therefore, it should be considered when designing and constructing adenovirus-based vectors.

1 January 2019 in Journal of Virology
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Journal Article
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Davor NestićDavor Nestić
Davor Nestić
TUTaco G Uil
Taco G Uil
JMJiangtao Ma
Jiangtao Ma
SRSoumitra Roy
Soumitra Roy
JVJort Vellinga
Jort Vellinga
DMDragomira Majhen
Dragomira Majhen
Human adenoviruses (HAdVs) are being explored as vectors for gene transfer and vaccination. Human adenovirus type 26 (HAdV26), which belongs to the largest subgroup of adenoviruses, species D, has a short fiber and a so far unknown natural tropism. Due to its low seroprevalence, HAdV26 has been considered a promising vector for the development of vaccines. Despite the fact that the in vivo safety and immunogenicity of HAdV26 has been extensively studied, the basic biology of this virus, with regard to receptor use, cell attachment, internalization and intracellular trafficking is poorly understood. In this work we investigated the role of the coxsackie- and adenovirus receptor (CAR), CD46 and αv integrins in HAdV26 infection of human epithelial cell lines. By performing different gain- and loss-of-function studies we found that αvβ3 integrin is required for efficient infection of epithelial cells by HAdV26, while CAR and CD46 did not increase transduction efficiency of HAdV26. By studying intracellular trafficking of fluorescently labeled HAdV26 in A549 cells and A549-derived cell clones with stably increased expression of αvβ3 integrin, we observed that HAdV26 co-localizes with αvβ3 integrin and that increased αvβ3 integrin enhances internalization of HAdV26. Thus we conclude that HAdV26 uses αvβ3 integrin as a receptor for infecting epithelial cells. These results give us new insight into the HAdV26 infection pathway and will be helpful in further defining HAdV-based vector manufacturing and vaccination strategies. IMPORTANCE Adenovirus-based vectors are used today for gene transfer and vaccination. HAdV26 has emerged as a promising candidate vector for development of vaccines due to its relatively low seroprevalence and its ability to induce potent immune responses against encoded transgenes. However, data regarding the basic biology of this virus, like receptor usage or intracellular trafficking, are limited. In this work we found that efficient infection of human epithelial cell lines by HAdV26 requires the expression of the αvβ3 integrin. By studying intracellular trafficking of fluorescently labeled HAdV26 in a cell clone with stably increased expression of αvβ3 integrin, we observed that HAdV26 co-localizes with αvβ3 integrin and confirmed that αvβ3 integrin expression facilitates efficient HAdV26 internalization. These results will allow us further improvement of HAdV26 based vectors for gene transfer and vaccination.

3 March 2020 in Frontiers in Cell and Developmental Biology
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Journal Article
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MPMladen Paradzik
Mladen Paradzik
JHJon Humphries
Jon Humphries
NSNikolina Stojanović
Nikolina Stojanović
Davor NestićDavor Nestić
Davor Nestić
DMDragomira Majhen
Dragomira Majhen
Andreja Ambriovic-RistovAndreja Ambriovic-Ristov
Andreja Ambriovic-Ristov
Integrins are heterodimeric glycoproteins that bind cells to extracellular matrix. Upon integrin clustering, multimolecular integrin adhesion complexes (IACs) are formed, creating links to the cell cytoskeleton. We have previously observed decreased cell migration and increased sensitivity to microtubule (MT) poisons, paclitaxel and vincristine, in the melanoma cell line MDA-MB-435S upon transfection with integrin αV-specific siRNA, suggesting a link between adhesion and drug sensitivity. To elucidate the underlying mechanism, we determined αV-dependent changes in IAC composition. Using mass spectrometry (MS)-based proteomics, we analyzed the components of isolated IACs of MDA-MB-435S cells and two MDA-MB-435S-derived integrin αV-specific shRNA-expressing cell clones with decreased expression of integrin αV. MS analysis showed that cells preferentially use integrin αVβ5 for the formation of IACs. The differential analysis between MDA-MB-435S cells and clones with decreased expression of integrin αV identified key components of integrin αVβ5 adhesion complexes as talins 1 and 2, α-actinins 1 and 4, filamins A and B, plectin and vinculin. The data also revealed decreased levels of several components of the cortical microtubule stabilization complex, which recruits MTs to adhesion sites (notably liprins α and β, ELKS, LL5β, MACF1, KANK1, and KANK2), following αV knockdown. KANK2 knockdown in MDA-MB-435S cells mimicked the effect of integrin αV knockdown and resulted in increased sensitivity to MT poisons and decreased migration. Taken together, we conclude that KANK2 is a key molecule linking integrin αVβ5 IACs to MTs, and enabling the actin-MT crosstalk that is important for both sensitivity to MT poisons and cell migration.

1 November 2020 in Toxicology
Verified
Journal Article
Closed access
Ksenija BožinovićKsenija Božinović
Ksenija Božinović
Davor NestićDavor Nestić
Davor Nestić
UCUrška Gradišar Centa
Urška Gradišar Centa
AAAndreja Ambriović-Ristov
Andreja Ambriović-Ristov
ADAna Dekanić
Ana Dekanić
DMDragomira Majhen
Dragomira Majhen

6 January 2020 in Cancer Gene Therapy
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SHSarah Hulin-Curtis
Sarah Hulin-Curtis
JDJames A. Davies
James A. Davies
Davor NestićDavor Nestić
Davor Nestić
EBEmily A. Bates
Emily A. Bates
Alexander BakerAlexander Baker
Alexander Baker
Alan ParkerAlan Parker
Alan Parker
Oncolytic virotherapies (OV) based on human adenoviral (HAdV) vectors hold significant promise for the treatment of advanced ovarian cancers where local, intraperitoneal delivery to tumour metastases is feasible, bypassing many complexities associated with intravascular delivery. The efficacy of HAdV-C5-based OV is hampered by a lack of tumour selectivity, where the primary receptor, hCAR, is commonly downregulated during malignant transformation. Conversely, folate receptor alpha (FRα) is highly expressed on ovarian cancer cells, providing a compelling target for tumour selective delivery of virotherapies. Here, we identify high-affinity FRα-binding oligopeptides for genetic incorporation into HAdV-C5 vectors. Biopanning identified a 12-mer linear peptide, DWSSWVYRDPQT, and two 7-mer cysteine-constrained peptides, CIGNSNTLC and CTVRTSAEC that bound FRα in the context of the phage particle. Synthesised lead peptide, CTVRTSAEC, bound specifically to FRα and could be competitively inhibited with folic acid. To assess the capacity of the elucidated FRα-binding oligopeptides to target OV to FRα, we genetically incorporated the peptides into the HAdV-C5 fiber-knob HI loop including in vectors genetically ablated for hCAR interactions. Unfortunately, the recombinant vectors failed to efficiently target transduction via FRα due to defective intracellular trafficking following entry via FRα, indicating that whilst the peptides identified may have potential for applications for targeted drug delivery, they require additional refinement for targeted virotherapy applications.

16 March 2022 in Molecular Therapy-Oncolytics
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Journal Article
Open access
EBEmily A. Bates
Emily A. Bates
JDJames A. Davies
James A. Davies
JVJana Váňová
Jana Váňová
Davor NestićDavor Nestić
Davor Nestić
VMValerie S. Meniel
Valerie S. Meniel
Alan ParkerAlan Parker
Alan Parker
Oncolytic virotherapies (OV) hold immense clinical potential. OV based on human adenoviruses (HAdV) derived from HAdV with naturally low rates of pre-existing immunity will be beneficial for future clinical translation. We generated a low-seroprevalence HAdV-D10 serotype vector incorporating an αvβ6 integrin-selective peptide, A20, to target αvβ6-positive tumor cell types. HAdV-D10 has limited natural tropism. Structural and biological studies of HAdV-D10 knob protein highlighted low-affinity engagement with native adenoviral receptors CAR and sialic acid. HAdV-D10 fails to engage blood coagulation factor X, potentially eliminating “off-target” hepatic sequestration in vivo. We engineered an A20 peptide that selectively binds αvβ6 integrin into the DG loop of HAdV-D10 fiber knob. Assays in αvβ6+ cancer cell lines demonstrated significantly increased transduction mediated by αvβ6-targeted variants compared with controls, confirmed microscopically. HAdV-D10.A20 resisted neutralization by neutralizing HAdV-C5 sera. Systemic delivery of HAdV-D10.A20 resulted in significantly increased GFP expression in BT20 tumors. Replication-competent HAdV-D10.A20 demonstrated αvβ6 integrin-selective cell killing in vitro and in vivo. HAdV-D10 possesses characteristics of a promising virotherapy, combining low seroprevalence, weak receptor interactions, and reduced off-target uptake. Incorporation of an αvβ6 integrin-selective peptide resulted in HAdV-D10.A20, with significant potential for clinical translation.