Daniel José Barbosa

Prof. Dr. Daniel José Barbosa

1. Cell Division Mechanisms Group, Institute for Research and Innovation in Health (i3S), University of Porto, Porto, Portugal
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Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 March 2017 in Journal of Cell Biology
Verified
Journal Article
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JGJosé B. Gama
José B. Gama
Cláudia PereiraCláudia Pereira
Cláudia Pereira
PSPatrícia A. Simões
Patrícia A. Simões
RCRicardo Celestino
Ricardo Celestino
RRRita M. Reis
Rita M. Reis
RGReto Gassmann
Reto Gassmann
The molecular motor dynein concentrates at the kinetochore region of mitotic chromosomes in animals to accelerate spindle microtubule capture and to control spindle checkpoint signaling. In this study, we describe the molecular mechanism used by the Rod–Zw10–Zwilch complex and the adaptor Spindly to recruit dynein to kinetochores in Caenorhabditis elegans embryos and human cells. We show that Rod’s N-terminal β-propeller and the associated Zwilch subunit bind Spindly’s C-terminal domain, and we identify a specific Zwilch mutant that abrogates Spindly and dynein recruitment in vivo and Spindly binding to a Rod β-propeller–Zwilch complex in vitro. Spindly’s N-terminal coiled-coil uses distinct motifs to bind dynein light intermediate chain and the pointed-end complex of dynactin. Mutations in these motifs inhibit assembly of a dynein–dynactin–Spindly complex, and a null mutant of the dynactin pointed-end subunit p27 prevents kinetochore recruitment of dynein–dynactin without affecting other mitotic functions of the motor. Conservation of Spindly-like motifs in adaptors involved in intracellular transport suggests a common mechanism for linking dynein to cargo.

1 September 2020 in Pharmacology & Therapeutics
Verified
Journal Article
Closed access
EMEva Gil Martins
Eva Gil Martins
Daniel José BarbosaDaniel José Barbosa
Daniel José Barbosa
VSVera Silva
Vera Silva
Fernando RemiãoFernando Remião
Fernando Remião
RSRenata Silva
Renata Silva

Verified
Journal Article
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Ana Filipa SobralAna Filipa Sobral
Ana Filipa Sobral
Andrea Teixeira da CunhaAndrea Teixeira da Cunha
Andrea Teixeira da Cunha
VSVera Silva
Vera Silva
EMEva Gil Martins
Eva Gil Martins
RSRenata Silva
Renata Silva
Daniel José BarbosaDaniel José Barbosa
Daniel José Barbosa
Cellular metabolism is crucial for various physiological processes, with folate-dependent one-carbon (1C) metabolism playing a pivotal role. Folate, a B vitamin, is a key cofactor in this pathway, supporting DNA synthesis, methylation processes, and antioxidant defenses. In dividing cells, folate facilitates nucleotide biosynthesis, ensuring genomic stability and preventing carcinogenesis. Additionally, in neurodevelopment, folate is essential for neural tube closure and central nervous system formation. Thus, dysregulation of folate metabolism can contribute to pathologies such as cancer, severe birth defects, and neurodegenerative diseases. Epidemiological evidence highlights folate’s impact on disease risk and its potential as a therapeutic target. In cancer, antifolate drugs that inhibit key enzymes of folate-dependent 1C metabolism and strategies targeting folate receptors are current therapeutic options. However, folate’s impact on cancer risk is complex, varying among cancer types and dietary contexts. In neurodegenerative conditions, including Alzheimer’s and Parkinson’s diseases, folate deficiency exacerbates cognitive decline through elevated homocysteine levels, contributing to neuronal damage. Clinical trials of folic acid supplementation show mixed outcomes, underscoring the complexities of its neuroprotective effects. This review integrates current knowledge on folate metabolism in cancer and neurodegeneration, exploring molecular mechanisms, clinical implications, and therapeutic strategies, which can provide crucial information for advancing treatments.

6 March 2015 in Archives of Toxicology
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Daniel José BarbosaDaniel José Barbosa
Daniel José Barbosa
João Paulo CapelaJoão Paulo Capela
João Paulo Capela
RFRita Feio-Azevedo
Rita Feio-Azevedo
ATArmanda Teixeira-Gomes
Armanda Teixeira-Gomes
MBMaria de Lourdes Bastos
Maria de Lourdes Bastos
Félix CarvalhoFélix Carvalho
Félix Carvalho

8 October 2013 in Archives of Toxicology
Verified
Journal Article
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Daniel José BarbosaDaniel José Barbosa
Daniel José Barbosa
João Paulo CapelaJoão Paulo Capela
João Paulo Capela
RSRenata Silva
Renata Silva
VVVânia Vilas-Boas
Vânia Vilas-Boas
Luisa FerreiraLuisa Ferreira
Luisa Ferreira
Félix CarvalhoFélix Carvalho
Félix Carvalho

7 January 2019 in PLOS Biology
Verified
Journal Article
Open access
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RCRicardo Celestino
Ricardo Celestino
MHMorkos A. Henen
Morkos A. Henen
JGJosé B Gama
José B Gama
CCCátia Carvalho
Cátia Carvalho
MMMaxwell C McCabe
Maxwell C McCabe
BVBeat Vögeli
Beat Vögeli
All animal cells use the motor cytoplasmic dynein 1 (dynein) to transport diverse cargo toward microtubule minus ends and to organize and position microtubule arrays such as the mitotic spindle. Cargo-specific adaptors engage with dynein to recruit and activate the motor, but the molecular mechanisms remain incompletely understood. Here, we use structural and dynamic nuclear magnetic resonance (NMR) analysis to demonstrate that the C-terminal region of human dynein light intermediate chain 1 (LIC1) is intrinsically disordered and contains two short conserved segments with helical propensity. NMR titration experiments reveal that the first helical segment (helix 1) constitutes the main interaction site for the adaptors Spindly (SPDL1), bicaudal D homolog 2 (BICD2), and Hook homolog 3 (HOOK3). In vitro binding assays show that helix 1, but not helix 2, is essential in both LIC1 and LIC2 for binding to SPDL1, BICD2, HOOK3, RAB-interacting lysosomal protein (RILP), RAB11 family-interacting protein 3 (RAB11FIP3), ninein (NIN), and trafficking kinesin-binding protein 1 (TRAK1). Helix 1 is sufficient to bind RILP, whereas other adaptors require additional segments preceding helix 1 for efficient binding. Point mutations in the C-terminal helix 1 of Caenorhabditis elegans LIC, introduced by genome editing, severely affect development, locomotion, and life span of the animal and disrupt the distribution and transport kinetics of membrane cargo in axons of mechanosensory neurons, identical to what is observed when the entire LIC C-terminal region is deleted. Deletion of the C-terminal helix 2 delays dynein-dependent spindle positioning in the one-cell embryo but overall does not significantly perturb dynein function. We conclude that helix 1 in the intrinsically disordered region of LIC provides a conserved link between dynein and structurally diverse cargo adaptor families that is critical for dynein function in vivo. The large size and complex organization of animal cells make the correct and efficient distribution of intracellular content a challenge. The solution is to use motor proteins, which harness energy from ATP hydrolysis to walk along actin filaments or microtubules, for directional transport of cargo. The multi-subunit motor cytoplasmic dynein 1 (dynein) is responsible for transport directed toward the minus ends of microtubules. An important question is how dynein is recruited to its diverse cargo, which includes organelles such as endosomes and mitochondria, proteins, and mRNA. In this study, we use nuclear magnetic resonance spectroscopy to show that the light intermediate chain (LIC) subunit of human dynein uses a short helix in its disordered C-terminal region to bind structurally distinct adaptor proteins that connect the motor to specific cargo. We then use genome editing in the animal model C. elegans to demonstrate the functional relevance of the C-terminal LIC helix for dynein-dependent cargo transport in neurons. Thus, dynein recruitment to cargo involves a highly conserved interaction between LIC and adaptor proteins.