Luk Rogelj

Mr. Luk Rogelj

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 November 2019 in Applied Optics
Verified
Journal Article
Closed access
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LRLuk Rogelj
Luk Rogelj
UPUrban Pavlovčič
Urban Pavlovčič
JSJošt Stergar
Jošt Stergar
MJMatija Jezeršek
Matija Jezeršek
USUrban Simončič
Urban Simončič
Matija MilanicMatija Milanic
Matija Milanic
Optical imaging systems use a light source that illuminates a sample and a photodetector that detects light reflected from or transmitted through the sample. The sample surface curvature, surface-to-camera distance, and illumination-source-to-surface distance significantly affect the measured signal, resulting in image artifacts. To correct the images, a three-dimensional (3D) profilometry system was used to obtain 3D surface information. The 3D information enables image correction using Lambert cosine law and height correction. In this study, the feasibility of the correction method for push-broom hyperspectral imaging of three different objects is presented. Results show a significant reduction of image artifacts, making further image analysis more accurate and robust. The presented 3D profilometry method is applicable to all push-broom imaging systems and the described correction procedure can be applied to all spectral or monochromatic imaging systems.

6 September 2021 in Journal of Biomedical Optics
Verified
Journal Article
Open access
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LRLuk Rogelj
Luk Rogelj
USUrban Simončič
Urban Simončič
TTTadej Tomanič
Tadej Tomanič
Matija JezersekMatija Jezersek
Matija Jezersek
UPUrban Pavlovčič
Urban Pavlovčič
Matija MilanicMatija Milanic
Matija Milanic
Optical imaging techniques have shown great potential in medical applications, primarily in disease diagnosis and surgical guidance.1 When light enters a tissue, it is affected by scattering or absorption in tissue chromophores, such as water, lipid, deoxyhemoglobin, oxyhemoglobin, and melanin.2 In diseased tissues, their absorption and scattering properties change, resulting in altered diffuse reflectance spectra compared with healthy tissue.3 Diffuse reflectance spectra can be measured by optical techniques, such as hyperspectral imaging (HSI),4 and quantitative information about tissue composition can be extracted from the measured images.

21 January 2022 in Biomedical Optics Express
Verified
Journal Article
Closed access
TTTadej Tomanič
Tadej Tomanič
LRLuk Rogelj
Luk Rogelj
MMMatija Milanič
Matija Milanič
Analysing diffuse reflectance spectra to extract properties of biological tissue requires modelling of light transport within the tissue, considering its absorption, scattering, and geometrical properties. Due to the layered skin structure, skin tissue models are often divided into multiple layers with their associated optical properties. Typically, in the analysis, some model parameters defining these properties are fixed to values reported in the literature to speed up the fitting process and improve its performance. In the absence of consensus, various studies use different approaches in fixing the model parameters. This study aims to assess the effect of fixing various model parameters in the skin spectra fitting process on the accuracy and robustness of a GPU-accelerated two-layer inverse adding-doubling (IAD) algorithm. Specifically, the performance of the IAD method is determined for noiseless simulated skin spectra, simulated spectra with different levels of noise applied, and in-vivo measured reflectance spectra from hyperspectral images of human hands recorded before, during, and after the arterial occlusion. Our results suggest that fixing multiple parameters to a priori known values generally improves the robustness and accuracy of the IAD algorithm for simulated spectra. However, for in-vivo measured spectra, these values are unknown in advance and fixing optical parameters to incorrect values significantly deteriorates the overall performance. Therefore, we propose a method to improve the fitting performance by pre-estimating model parameters. Our findings could be considered in all future research involving the analysis of diffuse reflectance spectra to extract optical properties of skin tissue.

21 September 2022 in Tomography
Verified
Journal Article
Open access
PDF file
LRLuk Rogelj
Luk Rogelj
RDRok Dolenec
Rok Dolenec
MTMartina Vivoda Tomšič
Martina Vivoda Tomšič
ELElmar Laistler
Elmar Laistler
USUrban Simončič
Urban Simončič
RHRok Hren
Rok Hren
Anatomically accurate models of a human finger can be useful in simulating various disorders. In order to have potential clinical value, such models need to include a large number of tissue types, identified by an experienced professional, and should be versatile enough to be readily tailored to specific pathologies. Magnetic resonance images were acquired at ultrahigh magnetic field (7 T) with a radio-frequency coil specially designed for finger imaging. Segmentation was carried out under the supervision of an experienced radiologist to accurately capture various tissue types (TTs). The final segmented model of the human index finger had a spatial resolution of 0.2 mm and included 6,809,600 voxels. In total, 15 TTs were identified: subcutis, Pacinian corpuscle, nerve, vein, artery, tendon, collateral ligament, volar plate, pulley A4, bone, cartilage, synovial cavity, joint capsule, epidermis and dermis. The model was applied to the conditions of arthritic joint, ruptured tendon and variations in the geometry of a finger. High-resolution magnetic resonance images along with careful segmentation proved useful in the construction of an anatomically accurate model of the human index finger. An example illustrating the utility of the model in biomedical applications is shown. As the model includes a number of tissue types, it may present a solid foundation for future simulations of various musculoskeletal disease processes in human joints.

5 February 2019 in TURKISH JOURNAL OF CHEMISTRY
Verified
Journal Article
Closed access
VRVesna Rastija
Vesna Rastija
MJMarijana Jukić
Marijana Jukić
TOTeuta Opačak-Bernardi
Teuta Opačak-Bernardi
LRLuk Rogelj
Luk Rogelj
ISIvana Stolić
Ivana Stolić
MBMiroslav Bajić
Miroslav Bajić