Md Nafiz Amin

Mr. Md Nafiz Amin

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 October 2024 in APL Photonics
Verified
Journal Article
Open access
PDF file
MAMd Nafiz Amin
Md Nafiz Amin
VGVahid Ganjalizadeh
Vahid Ganjalizadeh
TATyler J. Adams
Tyler J. Adams
PDPorter B. Dixon
Porter B. Dixon
ZWZoe Weber
Zoe Weber
Holger SchmidtHolger Schmidt
Holger Schmidt
Spectral analysis of light is one of the oldest and most versatile scientific methods and the basis of countless techniques and instruments. Miniaturized spectrometers have recently seen great advances, but challenges remain before they are widely deployed. We report an integrated photonic spectrometer that achieves high performance with minimal component complexity by combining imaging of light propagation patterns in multi-mode interference waveguides with machine learning analysis. We demonstrate broadband operation in the visible and near-infrared, 0.05 nm spectral resolution, and an array of four spectrometers on a single chip. Two canonical applications are implemented: spectral analysis of the solar spectrum with neural network reconstruction and detection of Rayleigh scattering from microbeads on an optofluidic chip using principal component classification. These results illustrate the potential of this approach for high-performance spectroscopy across disciplines.

15 November 2021 in IEEE Photonics Journal
Verified
Journal Article
Open access
MSMohammad Julker Neyen Sampad
Mohammad Julker Neyen Sampad
MAMd Nafiz Amin
Md Nafiz Amin
AHAaron Hawkins
Aaron Hawkins
Holger SchmidtHolger Schmidt
Holger Schmidt
Integrated optofluidic biosensors can fill the need for sensitive, amplification-free, multiplex single molecule detection which is relevant for containing the spread of infectious diseases such as COVID-19. Here, we demonstrate a rapid sample-to-answer scheme that uses a field programmable gate array (FPGA) to enable live monitoring of single particle fluorescence analysis on an optofluidic chip. Fluorescent nanobeads flowing through a micro channel are detected with 99% accuracy and particle concentrations in clinically relevant ranges from 3.4x10 4 to 3.4 × 10 6 /ml are determined within seconds to a few minutes without the need for post-experiment data extraction and analysis. In addition, other extract salient experimental parameters such as dynamic flow rate changes can be monitored in real time. The sensor is validated with real-time fluorescence detection of single bacterial plasmid DNA at attomolar concentrations, showing excellent promise for implementation as a point of care (POC) diagnostic tool.

4 December 2024 in Optics Express
Verified
Journal Article
Closed access
MAMd Nafiz Amin
Md Nafiz Amin
HRHelio Ramollari
Helio Ramollari
TYThomas D. Yuzvinsky
Thomas D. Yuzvinsky
ZWZoe Weber
Zoe Weber
TATyler J. Adams
Tyler J. Adams
HSHolger Schmidt
Holger Schmidt
Chip-scale integrated imaging spectrometers show significant potential for high-performance spectral analysis due to advancements in fabrication and computational techniques. Many practical applications, such as astronomy and molecular spectroscopy, require analyzing light at sub-nanowatt levels, where inherent enhancement in spectrometer signals can reduce the need for expensive photodetectors or long integration time. Previously, we introduced an integrated spectrometer scheme using machine learning to reconstruct spectra from imaging the wavelength-dependent patterns scattered out of a multimode interference (MMI) waveguide. In this work, we report a signal enhancement of 13.6 dB and an increase of device sensitivity and dynamic range by 15 dB by selective roughening of the waveguide surface via plasma etching. By imaging interference patterns at various points along the waveguide, we determine that the best spectrometer performance is achieved by imaging MMI sections with highest pattern variation. We report accurate spectral measurements using convolutional neural network-based spectral reconstruction with 1 nm resolution at input powers as low as 300 pW for the present experimental configuration, and a scattering coefficient of 1.109 cm-1 from the etched section.

30 March 2021 in IEEE Photonics Technology Letters
Verified
Journal Article
Closed access
MAMd Nafiz Amin
Md Nafiz Amin
VGVahid Ganjalizadeh
Vahid Ganjalizadeh
MHMatthew Hamblin
Matthew Hamblin
AHAaron Hawkins
Aaron Hawkins
Holger SchmidtHolger Schmidt
Holger Schmidt
Optofluidic sensors have enabled single molecule sensing using planar, waveguide dependent multi-spot fluorescence excitation. Here, we demonstrate a new approach to single-particle fluorescence sensing using free-space, top-down illumination of liquid-core antiresonant reflecting optical waveguide (ARROW) devices using two different multi-spot excitation techniques. First, the liquid core ARROW waveguide is excited with a focused beam through a slit pattern milled into an opaque aluminum film, showing comparable performance for single bead fluorescence detection as in-plane, multi-mode interference waveguide based excitation. The second top-down illumination technique images the spot pattern from a Y-splitter SiO 2 waveguide chip directly onto the detection device for efficient power utilization and circumventing the need for an opaque cover, producing a further $2.7\times $ improvement in signal-to-noise ratio. The two top-down approaches open up new possibilities for chip-based optical particle sensing with relaxed alignment tolerances.

29 August 2022
Verified
Conference Paper
Open access
MDMatthew Demartino
Matthew Demartino
KBKevin A. Bundy
Kevin A. Bundy
Holger SchmidtHolger Schmidt
Holger Schmidt
RKRenate Kupke
Renate Kupke
NMNick MacDonald
Nick MacDonald
ZWZoe Weber
Zoe Weber
SPIE Digital Library Proceedings

24 February 2021 in Journal of Lightwave Technology
Verified
Journal Article
Closed access
JWJoel Wright
Joel Wright
MAMd Nafiz Amin
Md Nafiz Amin
GMGopikrishnan G. Meena
Gopikrishnan G. Meena
Holger SchmidtHolger Schmidt
Holger Schmidt
AHAaron Hawkins
Aaron Hawkins
We present a model and simulation for predicting the detected signal of a fluorescence-based optical biosensor built from optofluidic waveguides. Typical applications include flow experiments to determine pathogen concentrations in a biological sample after tagging relevant DNA or RNA sequences. An overview of the biosensor geometry and fabrication processes is presented. The basis for the predictive model is also outlined. The model is then compared to experimental results for three different biosensor designs. The model is shown to have similar signal statistics as physical tests, illustrating utility as a pre-fabrication design tool and as a predictor of detection sensitivity.