Kavitha Muthu Subash

Prof. Kavitha Muthu Subash

School of Information and Data Sciences, Nagasaki University, Nagasaki, Japan
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Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 February 2023 in Applied Sciences
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Journal Article
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Mohan BhandariMohan Bhandari
Mohan Bhandari
PYPratheepan Yogarajah
Pratheepan Yogarajah
KSKavitha Muthu Subash
Kavitha Muthu Subash
Joan CondellJoan Condell
Joan Condell
Kidney abnormality is one of the major concerns in modern society, and it affects millions of people around the world. To diagnose different abnormalities in human kidneys, a narrow-beam x-ray imaging procedure, computed tomography, is used, which creates cross-sectional slices of the kidneys. Several deep-learning models have been successfully applied to computer tomography images for classification and segmentation purposes. However, it has been difficult for clinicians to interpret the model’s specific decisions and, thus, creating a “black box” system. Additionally, it has been difficult to integrate complex deep-learning models for internet-of-medical-things devices due to demanding training parameters and memory-resource cost. To overcome these issues, this study proposed (1) a lightweight customized convolutional neural network to detect kidney cysts, stones, and tumors and (2) understandable AI Shapely values based on the Shapley additive explanation and predictive results based on the local interpretable model-agnostic explanations to illustrate the deep-learning model. The proposed CNN model performed better than other state-of-the-art methods and obtained an accuracy of 99.52 ± 0.84% for K = 10-fold of stratified sampling. With improved results and better interpretive power, the proposed work provides clinicians with conclusive and understandable results.

4 September 2021 in Biomedicine & Pharmacotherapy
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Journal Article
Open access
MSMuhammad Dawood Shah
Muhammad Dawood Shah
ASAini Simon Sumeh
Aini Simon Sumeh
MSMuhammad Sheraz
Muhammad Sheraz
KSKavitha Muthu Subash
Kavitha Muthu Subash
Balu Alagar Venmathi MaranBalu Alagar Venmathi Maran
Balu Alagar Venmathi Maran
KRKenneth Francis Rodrigues
Kenneth Francis Rodrigues
COVID-19 (Corona Virus Disease-2019) is an infectious disease caused by a novel coronavirus, known as the acute respiratory syndrome coronavirus 2 (SARS-CoV-2). This is a highly contagious disease that has already affected more than 220 countries globally, infecting more than 212 million people and resulting in the death of over 4.4 million people. This review aims to highlight the pertinent documentary evidence upon the adverse effects of the SARS-CoV-2 infection on several vital human organs. SARS-CoV-2 primarily targets the lung tissue by causing diffuse alveolar damage and may result in Acute Respiratory Distress Syndrome (ARDS). SARS-CoV-2 infects the cell via cell surface receptor, angiotensin-converting enzyme 2 (ACE2). Besides lungs, SARS-CoV-2 critically damage tissues in other vital human organs such as the heart, kidney, liver, brain, and gastrointestinal tract. The effect on the heart includes muscle dysfunction (acute or protracted heart failure), myocarditis, and cell necrosis. Within hepatic tissue, it alters serum aminotransferase, total bilirubin, and gamma-glutamyl transferase levels. It contributes to acute kidney injury (AKI). Localized infection of the brain can lead to loss or attenuation of olfaction, muscular pain, headaches, encephalopathy, dizziness, dysgeusia, psychomotor disorders, and stroke; while the gastrointestinal symptoms include the disruption of the normal intestinal mucosa, leading to diarrhea and abdominal pain. This review encompassed a topical streak of systemic malfunctions caused by the SARS-CoV-2 infection. As the pandemic is still in progress, more studies will enrich our understanding and analysis of this disease.

29 July 2022 in Cancers
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KSKavitha Muthu Subash
Kavitha Muthu Subash
Prakash GangadaranPrakash Gangadaran
Prakash Gangadaran
AJAurelia Jackson
Aurelia Jackson
Balu Alagar Venmathi MaranBalu Alagar Venmathi Maran
Balu Alagar Venmathi Maran
TKTakio Kurita
Takio Kurita
Byeong-Cheol AhnByeong-Cheol Ahn
Byeong-Cheol Ahn
Early detection of colorectal cancer can significantly facilitate clinicians’ decision-making and reduce their workload. This can be achieved using automatic systems with endoscopic and histological images. Recently, the success of deep learning has motivated the development of image- and video-based polyp identification and segmentation. Currently, most diagnostic colonoscopy rooms utilize artificial intelligence methods that are considered to perform well in predicting invasive cancer. Convolutional neural network-based architectures, together with image patches and preprocesses are often widely used. Furthermore, learning transfer and end-to-end learning techniques have been adopted for detection and localization tasks, which improve accuracy and reduce user dependence with limited datasets. However, explainable deep networks that provide transparency, interpretability, reliability, and fairness in clinical diagnostics are preferred. In this review, we summarize the latest advances in such models, with or without transparency, for the prediction of colorectal cancer and also address the knowledge gap in the upcoming technology.

27 December 2017 in PLOS ONE
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KSKavitha Muthu Subash
Kavitha Muthu Subash
TKTakio Kurita
Takio Kurita
SPSoon-Yong Park
Soon-Yong Park
SCSung-Il Chien
Sung-Il Chien
JBJae-Sung Bae
Jae-Sung Bae
Byeong-Cheol AhnByeong-Cheol Ahn
Byeong-Cheol Ahn
Pluripotent stem cells can potentially be used in clinical applications as a model for studying disease progress. This tracking of disease-causing events in cells requires constant assessment of the quality of stem cells. Existing approaches are inadequate for robust and automated differentiation of stem cell colonies. In this study, we developed a new model of vector–based convolutional neural network (V-CNN) with respect to extracted features of the induced pluripotent stem cell (iPSC) colony for distinguishing colony characteristics. A transfer function from the feature vectors to the virtual image was generated at the front of the CNN in order for classification of feature vectors of healthy and unhealthy colonies. The robustness of the proposed V-CNN model in distinguishing colonies was compared with that of the competitive support vector machine (SVM) classifier based on morphological, textural, and combined features. Additionally, five-fold cross-validation was used to investigate the performance of the V-CNN model. The precision, recall, and F-measure values of the V-CNN model were comparatively higher than those of the SVM classifier, with a range of 87–93%, indicating fewer false positives and false negative rates. Furthermore, for determining the quality of colonies, the V-CNN model showed higher accuracy values based on morphological (95.5%), textural (91.0%), and combined (93.2%) features than those estimated with the SVM classifier (86.7, 83.3, and 83.4%, respectively). Similarly, the accuracy of the feature sets using five-fold cross-validation was above 90% for the V-CNN model, whereas that yielded by the SVM model was in the range of 75–77%. We thus concluded that the proposed V-CNN model outperforms the conventional SVM classifier, which strongly suggests that it as a reliable framework for robust colony classification of iPSCs. It can also serve as a cost-effective quality recognition tool during culture and other experimental procedures.

28 February 2023 in Diagnostics
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BABalasundaram Ananthakrishnan
Balasundaram Ananthakrishnan
ASAyesha Shaik
Ayesha Shaik
SKSoham Kumar
Soham Kumar
SNS. O. Narendran
S. O. Narendran
KMKhushi Mattu
Khushi Mattu
KSKavitha Muthu Subash
Kavitha Muthu Subash
This work aims to classify normal and carcinogenic cells in the oral cavity using two different approaches with an eye towards achieving high accuracy. The first approach extracts local binary patterns and metrics derived from a histogram from the dataset and is fed to several machine-learning models. The second approach uses a combination of neural networks as a backbone feature extractor and a random forest for classification. The results show that information can be learnt effectively from limited training images using these approaches. Some approaches use deep learning algorithms to generate a bounding box that can locate the suspected lesion. Other approaches use handcrafted textural feature extraction techniques and feed the resultant feature vectors to a classification model. The proposed method will extract the features pertaining to the images using pre-trained convolution neural networks (CNN) and train a classification model using the resulting feature vectors. By using the extracted features from a pre-trained CNN model to train a random forest, the problem of requiring a large amount of data to train deep learning models is bypassed. The study selected a dataset consisting of 1224 images, which were divided into two sets with varying resolutions.The performance of the model is calculated based on accuracy, specificity, sensitivity, and the area under curve (AUC). The proposed work is able to produce a highest test accuracy of 96.94% and an AUC of 0.976 using 696 images of 400× magnification and a highest test accuracy of 99.65% and an AUC of 0.9983 using only 528 images of 100× magnification images.

21 December 2016 in PLOS ONE
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KSKavitha Muthu Subash
Kavitha Muthu Subash
SPSoon-Yong Park
Soon-Yong Park
MHMin-Suk Heo
Min-Suk Heo
SCSung-Il Chien
Sung-Il Chien
It is important to investigate the irregularities in aging-associated changes in bone, between men and women for bone strength and osteoporosis. The purpose of this study was to characterize the changes and associations of mandibular cortical and trabecular bone measures of men and women based on age and to the evaluation of cortical shape categories, in a large Korean population. Panoramic radiographs of 1047 subjects (603 women and 444 men) aged between 15 to 90 years were used. Mandibular cortical width (MCW), mandibular cortical index (MCI), and fractal dimensions (FD) of the molar, premolar, and anterior regions of the mandibular trabecular bone were measured. Study subjects were grouped into six 10-years age groups. A local linear regression smoothing with bootstrap resampling for robust fitting of data was used to estimate the relationship between radiographic mandibular variables and age groups as well as genders. The mean age of women (49.56 ± 19.5 years) was significantly higher than that of men (45.57 ± 19.6 years). The MCW of men and women (3.17mm and 2.91mm, respectively, p < 0.0001) was strongly associated with age and MCI. Indeed, trabecular measures also correlated with age in men (r > −0.140, p = 0.003), though not as strongly as in women (r > −0.210, p < 0.0001). In men aged over 55 years, only MCW was significantly associated (r = −0.412, p < 0.0001). Furthermore, by comparison of mandibular variables from different age groups and MCI categories, the results suggest that MCW was detected to be strongly associated in both men and women for the detection of bone strength and osteoporosis. The FD measures revealed relatively higher association with age among women than men, but not as strong as MCW.