Njogu M. Kimani

Dr. Njogu M. Kimani

Physical Sciences, University of Embu, Embu, Kenya
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 January 2023 in Molecules
Verified
Journal Article
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LSLuciane Silva
Luciane Silva
EFELENILZE FERREIRA
ELENILZE FERREIRA
MSMaryam Rasool Satti
Maryam Rasool Satti
JRJosé Manuel Espejo Román
José Manuel Espejo Román
GCGlauber V. Costa
Glauber V. Costa
Cleydson Breno Rodrigues dos SantosCleydson Breno Rodrigues dos Santos
Cleydson Breno Rodrigues dos Santos
Acetylcholinesterase (AChE) enzymes play an essential role in the development of Alzheimer’s disease (AD). Its excessive activity causes several neuronal problems, particularly psychopathies and neuronal cell death. A bioactive pose on the hAChE B site of the human acetylcholinesterase (hAChE) enzyme employed in this investigation, which was obtained from the Protein Data Bank (PDB ID 4EY6), allowed for the prediction of the binding affinity and free binding energy between the protein and the ligand. Virtual screening was performed to obtain structures similar to Galantamine (GNT) with potential hAChE activity. The top 200 hit compounds were prioritized through the use of filters in ZincPharmer, with special features related to the pharmacophore. Critical analyses were carried out, such as hierarchical clustering analysis (HCA), ADME/Tox predictions, molecular docking, molecular simulation studies, synthetic accessibility (SA), lipophilicity, water solubility, and hot spots to confirm the stable binding of the two promising molecules (ZINC16951574-LMQC2, and ZINC08342556-LMQC5). The metabolism prediction, with metabolites M3-2, which is formed by Glutathionation reaction (Phase II), M1-2, and M2-2 formed from the reaction of S-oxidation and Aliphatic hydroxylation (Phase I), were both reactive but with no side effects. Theoretical synthetic routes and prediction of synthetic accessibility for the most promising compounds are also proposed. In conclusion, this study shows that in silico modeling can be used to create new drug candidate inhibitors for hAChE. The compounds ZINC16951574-LMQC2, and ZINC08342556-LMQC5 are particularly promising for oral administration because they have a favorable drug-likeness profile, excellent lipid solubility, high bioavailability, and adequate pharmacokinetics.

Verified
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RSRai Campos Silva
Rai Campos Silva
Humberto Fonseca de FreitasHumberto Fonseca de Freitas
Humberto Fonseca de Freitas
JCJoaquín M. Campos
Joaquín M. Campos
Njogu M. KimaniNjogu M. Kimani
Njogu M. Kimani
CSCarlos H. T. P. Silva
Carlos H. T. P. Silva
Cleydson Breno Rodrigues dos SantosCleydson Breno Rodrigues dos Santos
Cleydson Breno Rodrigues dos Santos
Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has received global attention due to the serious threat it poses to public health. Since the outbreak in December 2019, millions of people have been affected and its rapid global spread has led to an upsurge in the search for treatment. To discover hit compounds that can be used alone or in combination with repositioned drugs, we first analyzed the pharmacokinetic and toxicological properties of natural products from Brazil’s semiarid region. After, we analyzed the site prediction and druggability of the SARS-CoV-2 main protease (Mpro), followed by docking and molecular dynamics simulation. The best SARS-CoV-2 Mpro complexes revealed that other sites were accessed, confirming that our approach could be employed as a suitable starting protocol for ligand prioritization, reinforcing the importance of catalytic cysteine-histidine residues and providing new structural data that could increase the antiviral development mainly against SARS-CoV-2. Here, we selected 10 molecules that could be in vitro assayed in response to COVID-19. Two compounds (b01 and b02) suggest a better potential for interaction with SARS-CoV-2 Mpro and could be further studied.

1 May 2022 in Current Medicinal Chemistry
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JCJosiane Viana Cruz
Josiane Viana Cruz
JCJoaquín M. Campos
Joaquín M. Campos
Njogu M. KimaniNjogu M. Kimani
Njogu M. Kimani
SGSilvana Giuliatti
Silvana Giuliatti
Cleydson Breno Rodrigues dos SantosCleydson Breno Rodrigues dos Santos
Cleydson Breno Rodrigues dos Santos
This article aims at reviewing celecoxib as a potential inhibitor in the treatment of inflammatory diseases. The enzyme cyclooxygenase (COX) predominantly has two isoforms called cyclooxygenase 1 (COX-1) and cyclooxygenase 2 (COX-2). The former plays a constitutive role related to homeostatic effects in renal and platelets, while the latter is mainly responsible for the induction of inflammatory effects. Since COX-2 plays an important role in the pathogenesis of inflammatory diseases, it has been signaled as a target for the planning of anti-inflammatory intermediates. Many inhibitors developed and planned for COX-2 inhibition have presented side effects to humans, mainly in the gastrointestinal and/or cardiovascular tract. Therefore, it is necessary to design new potential COX-2 inhibitors, which are relatively safe and have no side effects. In this sense, celecoxib is the only potent, selective COX-2 inhibitor that is still commercially available (within the “coxib” family). Thus, celecoxib became a commercial prototype inhibitor for the development of anti-inflammatory agents for the COX-2 enzyme. This review provides inhibition highlights that should provide a structural basis for the design of promising new non-steroidal anti-inflammatory drugs (NSAIDs), which act as COX-2 inhibitors with lesser side effects on the human body.

15 December 2017 in Journal of Natural Products
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Closed access
Njogu M. KimaniNjogu M. Kimani
Njogu M. Kimani
JMJosphat C. Matasyoh
Josphat C. Matasyoh
MKMarcel Kaiser
Marcel Kaiser
RBReto Brun
Reto Brun
Thomas J. SchmidtThomas J. Schmidt
Thomas J. Schmidt

29 March 2023 in South African Journal of Botany
Verified
Journal Article
Open access
POPrince Ojuka
Prince Ojuka
Njogu M. KimaniNjogu M. Kimani
Njogu M. Kimani
SASeth Apollo
Seth Apollo
JNJames Nyariki
James Nyariki
RRRyan S. Ramos
Ryan S. Ramos
CSCleydson B.R. Santos
Cleydson B.R. Santos

16 April 2024 in Pharmaceuticals
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SKShadrack Kibet
Shadrack Kibet
Njogu M. KimaniNjogu M. Kimani
Njogu M. Kimani
SMSylviah Syombua Mwanza
Sylviah Syombua Mwanza
CMCynthia Mudalungu
Cynthia Mudalungu
Cleydson Breno Rodrigues dos SantosCleydson Breno Rodrigues dos Santos
Cleydson Breno Rodrigues dos Santos
CTChrysantus Tanga
Chrysantus Tanga
Natural products hold immense potential for drug discovery, yet many remain unexplored in vast libraries and databases. In an attempt to fill this gap and meet the growing demand for effective drugs, this study delves into the promising world of ent-kaurane diterpenoids, a class of natural products with huge therapeutic potential. With a dataset of 570 ent-kaurane diterpenoids obtained from the literature, we conducted an in silico analysis, evaluating their physicochemical, pharmacokinetic, and toxicological properties with a focus on their therapeutic implications. Notably, these natural compounds exhibit drug-like properties, aligning closely with those of FDA-approved drugs, indicating a high potential for drug development. The ranges of the physicochemical parameters were as follows: molecular weights—288.47 to 626.82 g/mol; number of heavy atoms—21 to 44; the number of hydrogen bond donors and acceptors—0 to 8 and 1 to 11, respectively; the number of rotatable bonds—0 to 11; fraction Csp3—0.65 to 1; and TPSA—20.23 to 189.53 Ų. Additionally, the majority of these molecules display favorable safety profiles, with only 0.70%, 1.40%, 0.70%, and 46.49% exhibiting mutagenic, tumorigenic, reproduction-enhancing, and irritant properties, respectively. Importantly, ent-kaurane diterpenoids exhibit promising biopharmaceutical properties. Their average lipophilicity is optimal for drug absorption, while over 99% are water-soluble, facilitating delivery. Further, 96.5% and 28.20% of these molecules exhibited intestinal and brain bioavailability, expanding their therapeutic reach. The predicted pharmacological activities of these compounds encompass a diverse range, including anticancer, immunosuppressant, chemoprotective, anti-hepatic, hepatoprotectant, anti-inflammation, antihyperthyroidism, and anti-hepatitis activities. This multi-targeted profile highlights ent-kaurane diterpenoids as highly promising candidates for further drug discovery endeavors.