According to the guidelines of the Nagoya Protocol, species are now recognized as ‘resources’ and owned by each country, thereby emphasizing the significance of biological resources and the importance of the continuous efforts made to systematically manage them. Despite these efforts, climate change, which influences climatic factors such as temperature and precipitation, is expected to negatively impact the struggle for conservation of biological resources by affecting species’ habitats. We aimed to devise methodologies that could be utilized for the management of biological resources, especially valuable tree species, that are experiencing difficulties due to climate change. First, changes in habitat of the northern-region plant Needle fir (Abies holophylla) due to of climate change were estimated using the BIOMOD2 package in R under the RCP8.5 scenario. Second, the time period of management was estimated based on the change in habitat area over time. It is expected that 30% of the current habitat of A. holophylla will be lost by 2030 and 50% will be lost by 2042. Third, four management zones (maintenance, reduction, dispersal, and non-habitat areas) were derived by comparing habitats according to the period of management required. In this case, we compared the present and the time point at which 30% habitat loss (2030) is expected to occur. After that, the management steps that can be taken for each management zone were suggested. Our results show the impact of climate change, especially change in Bio1 (annual mean temperature) and Bio13 (precipitation of wettest month), on species distribution patterns and have potential applicability in biological resource management. We have specified the suitable point of time, area, and direction of management in this study, which will contribute to climate change management planning and policy-making. By doing so, we hope that when a management policy on biological resources is applied, by dividing the four management zones, policymakers will be able to apply a cost-efficient policy.