Advances in Unmanned Aerial Vehicle (UAV) technology and data processing capabilities have made it feasible to obtain high-resolution imagery and three dimensional (3D) data which can be used for forest monitoring and assessing tree attributes. This study evaluates the applicability of low consumer grade cameras attached to UAVs and structure-from-motion (SfM) algorithm for automatic individual tree detection (ITD) using a local-maxima based algorithm on UAV-derived Canopy Height Models (CHMs). This study was conducted in a private forest at Cache Creek located east of Jackson city, Wyoming. Based on the UAV-imagery, we allocated 30 field plots of 20 m × 20 m. For each plot, the number of trees was counted manually using the UAV-derived orthomosaic for reference. A total of 367 reference trees were counted as part of this study and the algorithm detected 312 trees resulting in an accuracy higher than 85% (F-score of 0.86). Overall, the algorithm missed 55 trees (omission errors), and falsely detected 46 trees (commission errors) resulting in a total count of 358 trees. We further determined the impact of fixed tree window sizes (FWS) and fixed smoothing window sizes (SWS) on the ITD accuracy, and detected an inverse relationship between tree density and FWS. From our results, it can be concluded that ITD can be performed with an acceptable accuracy (F > 0.80) from UAV-derived CHMs in an open canopy forest, and has the potential to supplement future research directed towards estimation of above ground biomass and stem volume from UAV-imagery.

Accurate forest parameters are essential for forest inventory. Traditionally, parameters such as diameter at breast height (DBH) and total height are measured in the field by level gauges and hypsometers. However, field inventories are usually based on sample plots, which, despite providing valuable and necessary information, are laborious, expensive, and spatially limited. Most of the work developed for remote measurement of DBH has used terrestrial laser scanning (TLS), which has high density point clouds, being an advantage for the accurate forest inventory. However, TLS still has a spatial limitation to application because it needs to be manually carried to reach the area of interest, requires sometimes challenging field access, and often requires a field team. UAV-borne (unmanned aerial vehicle) lidar has great potential to measure DBH as it provides much higher density point cloud data as compared to aircraft-borne systems. Here, we explore the potential of a UAV-lidar system (GatorEye) to measure individual-tree DBH and total height using an automatic approach in an integrated crop-livestock-forest system with seminal forest plantations of Eucalyptus benthamii. A total of 63 trees were georeferenced and had their DBH and total height measured in the field. In the high-density (>1400 points per meter squared) UAV-lidar point cloud, we applied algorithms (usually used for TLS) for individual tree detection and direct measurement of tree height and DBH. The correlation coefficients (r) between the field-observed and UAV lidar-derived measurements were 0.77 and 0.91 for DBH and total tree height, respectively. The corresponding root mean square errors (RMSE) were 11.3% and 7.9%, respectively. UAV-lidar systems have the potential for measuring relatively broad-scale (thousands of hectares) forest plantations, reducing field effort, and providing an important tool to aid decision making for efficient forest management. We recommend that this potential be explored in other tree plantations and forest environments.

Airborne lidar is a technology well-suited for mapping many forest attributes, including aboveground biomass (AGB) stocks and changes in selective logging in tropical forests. However, trade-offs still exist between lidar pulse density and accuracy of AGB estimates. We assessed the impacts of lidar pulse density on the estimation of AGB stocks and changes using airborne lidar and field plot data in a selectively logged tropical forest located near Paragominas, Pará, Brazil. Field-derived AGB was computed at 85 square 50 × 50 m plots in 2014. Lidar data were acquired in 2012 and 2014, and for each dataset the pulse density was subsampled from its original density of 13.8 and 37.5 pulses·m⁻² to lower densities of 12, 10, 8, 6, 4, 2, 0.8, 0.6, 0.4 and 0.2 pulses·m⁻². For each pulse density dataset, a power-law model was developed to estimate AGB stocks from lidar-derived mean height and corresponding changes between the years 2012 and 2014. We found that AGB change estimates at the plot level were only slightly affected by pulse density. However, at the landscape level we observed differences in estimated AGB change of >20 Mg·ha⁻¹ when pulse density decreased from 12 to 0.2 pulses·m⁻². The effects of pulse density were more pronounced in areas of steep slope, especially when the digital terrain models (DTMs) used in the lidar derived forest height were created from reduced pulse density data. In particular, when the DTM from high pulse density in 2014 was used to derive the forest height from both years, the effects on forest height and the estimated AGB stock and changes did not exceed 20 Mg·ha⁻¹. The results suggest that AGB change can be monitored in selective logging in tropical forests with reasonable accuracy and low cost with low pulse density lidar surveys if a baseline high-quality DTM is available from at least one lidar survey. We recommend the results of this study to be considered in developing projects and national level MRV systems for REDD+ emission reduction programs for tropical forests.

Individual tree crown (ITC) segmentation is an approach to isolate individual tree from the background vegetation and delineate precisely the crown boundaries for forest management and inventory purposes. ITC detection and delineation have been commonly generated from canopy height model (CHM) derived from light detection and ranging (LiDAR) data. Existing ITC segmentation methods, however, are limited in their efficiency for characterizing closed canopies, especially in tropical forests, due to the overlapping structure and irregular shape of tree crowns. Furthermore, the potential of 3-dimensional (3D) LiDAR data is not fully realized by existing CHM-based methods. Thus, the aim of this study was to develop an efficient framework for ITC segmentation in tropical forests using LiDAR-derived CHM and 3D point cloud data in order to accurately estimate tree attributes such as the tree height, mean crown width and aboveground biomass (AGB). The proposed framework entails five major steps: (1) automatically identifying dominant tree crowns by implementing semi-variogram statistics and morphological analysis; (2) generating initial tree segments using a watershed algorithm based on mathematical morphology; (3) identifying “problematic” segments based on predetermined set of rules; (4) tuning the problematic segments using a modified distance-based algorithm (DBA); and (5) segmenting and counting the number of individual trees based on the 3D LiDAR point clouds within each of the identified segment. This approach was developed in a way such that the 3D LiDAR points were only examined on problematic segments identified for further evaluations. 209 reference trees with diameter at breast height (DBH) ≥ 10 cm were selected in the field in two study areas in order to validate ITC detection and delineation results of the proposed framework. We computed tree crown metrics (e.g., maximum crown height and mean crown width) to estimate aboveground biomass (AGB) at tree level using previously published allometric equations. Accuracy assessment was performed to calculate percentage of correctly detected trees, omission and commission errors. Our method correctly identified individual tree crowns with detection accuracy exceeding 80 percent at both forest sites. Also, our results showed high agreement (R² > 0.64) in terms of AGB estimates using 3D LiDAR metrics and variables measured in the field, for both sites. The findings from our study demonstrate the efficacy of the proposed framework in delineating tree crowns, even in high canopy density areas such as tropical rainforests, where, usually the traditional algorithms are limited in their performances. Moreover, the high tree delineation accuracy in the two study areas emphasizes the potential robustness and transferability of our approach to other densely forested areas across the globe.

Improvements in the management of pine plantations result in multiple industrial and environmental benefits. Remote sensing techniques can dramatically increase the efficiency of plantation management by reducing or replacing time-consuming field sampling. We tested the utility and accuracy of combining field and airborne lidar data with Random Forest, a supervised machine learning algorithm, to estimate stem total and assortment (commercial and pulpwood) volumes in an industrial Pinus taeda L. forest plantation in southern Brazil. Random Forest was populated using field and lidar-derived forest metrics from 50 sample plots with trees ranging from three to nine years old. We found that a model defined as a function of only two metrics (height of the top of the canopy and the skewness of the vertical distribution of lidar points) has a very strong and unbiased predictive power. We found that predictions of total, commercial, and pulp volume, respectively, showed an adjusted R² equal to 0.98, 0.98 and 0.96, with unbiased predictions of −0.17%, −0.12% and −0.23%, and Root Mean Square Error (RMSE) values of 7.83%, 7.71% and 8.63%. Our methodology makes use of commercially available airborne lidar and widely used mathematical tools to provide solutions for increasing the industry efficiency in monitoring and managing wood volume.

Individual tree detection (ITD) and crown delineation are two of the most relevant methods for extracting detailed and reliable forest information from LiDAR (Light Detection and Ranging) datasets. However, advanced computational skills and specialized knowledge have been normally required to extract forest information from LiDAR. The development of accessible tools for 3D forest characterization can facilitate rapid assessment by stakeholders lacking a remote sensing background, thus fostering the practical use of LiDAR datasets in forest ecology and conservation. This paper introduces the treetop application, an open‐source web‐based and R package LiDAR analysis tool for extracting forest structural information at the tree level, including cutting‐edge analyses of properties related to forest ecology and management. We provide case studies of how treetop can be used for different ecological applications, within various forest ecosystems. Specifically, treetop was employed to assess post‐hurricane disturbance in natural temperate forests, forest homogeneity in industrial forest plantations and the spatial distribution of individual trees in a tropical forest. treetop simplifies the extraction of relevant forest information for forest ecologists and conservationists who may use the tool to easily visualize tree positions and sizes, conduct complex analyses and download results including individual tree lists and figures summarizing forest structural properties. Through this open‐source approach, treetop can foster the practical use of LiDAR data among forest conservation and management stakeholders and help ecological researchers to further understand the relationships between forest structure and function.