Krishna Ghimire

Dr. Krishna Ghimire

South Dakota State University, Brookings, Oregon, USA
orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2019 in Plant Disease
Verified
Journal Article
Open access
KGKrishna Ghimire
Krishna Ghimire
Kristina PetrovićKristina Petrović
Kristina Petrović
BKBrian J. Kontz
Brian J. Kontz
CBCarl A. Bradley
Carl A. Bradley
MCMartin Chilvers
Martin Chilvers
FMFebina Mathew
Febina Mathew
One hundred fifty-two Diaporthe isolates were recovered from symptomatic soybean (Glycine max) stems sampled from the U.S. states of Iowa, Indiana, Kentucky, Michigan, and South Dakota. Using morphology and DNA sequencing, isolates were identified as D. aspalathi (8.6%), D. caulivora (24.3%), and D. longicolla (67.1%). Aggressiveness of five isolates each of the three pathogens was studied on cultivars Hawkeye (D. caulivora and D. longicolla) and Bragg (D. aspalathi) using toothpick, stem-wound, mycelium contact, and spore injection inoculation methods in the greenhouse. For D. aspalathi, methods significantly affected disease severity (P < 0.001) and pathogen recovery (P < 0.001). The relative treatment effects (RTE) of stem-wound and toothpick methods were significantly greater than for the other methods. For D. caulivora and D. longicolla, a significant isolate × method interaction affected disease severity (P < 0.05) and pathogen recovery (P < 0.001). Significant differences in RTEs were observed among D. caulivora and D. longicolla isolates only when the stem-wound and toothpick methods were used. Our study has determined that the stem-wound and toothpick methods are reliable to evaluate the three pathogens; however, the significant isolate × method interactions for D. caulivora and D. longicolla indicate that multiple isolates should also be considered for future pathogenicity studies.

9 January 2024 in Agriculture
Verified
Journal Article
Open access
PDF file
KGKrishna Ghimire
Krishna Ghimire
IMIsabel McIntyre
Isabel McIntyre
MCMelanie Caffe
Melanie Caffe
The increase in intensity and frequency of drought due to global climate change has increased the urgency of developing crop cultivars suitable for dry environments. Drought tolerance is a complex trait that involves numerous physiological, biochemical, and morphological responses. A better understanding of those mechanisms is critical to develop drought tolerant cultivars. In this study, we aimed to understand the morphophysiological changes at the shoot and root levels in response to drought stress of ten oat genotypes with diverse root morphological characteristics. Twenty-one-day old plants were subjected to drought stress in a greenhouse by withholding water for two weeks. Several characteristics including chlorophyll content, relative water content (RWC), stomatal conductance, stomata number, shoot dry weight (SDW), root dry weight (RDW), root-to-shoot biomass ratio (RSR), root length, root area, and root volume were measured on well-watered, and drought-stressed plants. Grain yield was evaluated by continuing the drought treatment with a drying and rewatering cycle every 15 days until physiological maturity. The water regime had a significant impact on all traits evaluated. A significant interaction between genotype and water treatment was observed for RWC, chlorophyll content, stomatal conductance, stomata number, and grain yield but not for root traits, suggesting that the root system of all genotypes responded similarly to drought stress. Hayden, the cultivar with the lowest reduction in grain yield from the drought treatment, was among the genotypes with the lowest reduction in RWC and chlorophyll content but with a sharp decrease in stomata number, thus indicating that regulating the plant water status and maintaining the photosynthesis level are important for oat plants to maintain grain yield under drought stress. The size of the root system was not correlated with grain yield under drought, but the RWC and grain yield were significantly correlated under drought, thus suggesting that maintaining the RWC is an important characteristic for oat plants to maintain yield under drought stress.

25 March 2021 in Journal of Agronomy and Crop Science
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Journal Article
Closed access
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KGKrishna Ghimire
Krishna Ghimire
SGSurbhi Gupta
Surbhi Gupta
SGSisi Geng
Sisi Geng
Sixue ChenSixue Chen
Sixue Chen
ABArvid Boe
Arvid Boe
YWYajun Wu
Yajun Wu

Verified
Journal Article
Open access
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KGKrishna Ghimire
Krishna Ghimire
VPVincent Peta
Vincent Peta
HBHeike Bücking
Heike Bücking
MCMelanie Caffe
Melanie Caffe
Endophytic bacteria are known to influence vital activities of host plants. Endophytes can promote plant growth and provide a defense response against pathogens. The use of endophytes in crop production has the potential to reduce the application of fertilizer and pesticide input and thus improve the sustainability of crop production. In this study, we investigated the effects of seed inoculation with non-native endophytic bacteria, harvested from Brassica carinata, on oat (Avena sativa L.) growth with root vigor assays and greenhouse experiments. For root vigor assay experiments, seeds of two different oat cultivars were treated with 16 endophytic bacteria previously shown to promote growth benefits on multiple crop species. For the greenhouse experiments, the effect of seed inoculation with bacterial isolates was evaluated on ten oat cultivars at two fertilization levels. The root vigor assay showed that multiple isolates, including Bacillus licheniformis, Enterobacter kobei, B. halotolerans, B. cereus, B. aryabhattai, and Lysinibacillus fusiformis, had a positive effect on seedling root growth in one of the two oat cultivars. In the other cultivar, the bacterial isolates had either no effect or a negative effect on root growth. Greenhouse studies showed that the magnitude and direction of the effect of bacterial inoculation on oat growth varied with fertilization levels, bacterial strain, and oat cultivar. However, we identified two cultivars that were more responsive to bacterial inoculation than the others and for which bacterial inoculation of seed resulted in enhanced growth in several traits under both reduced and full nitrogen levels, and this response was observed for the two isolates tested. Our results show that inoculating oat seeds with non-native bacterial endophytes can promote root and shoot growth in oats. Developing biofertilizers that are effective across crop species, crop cultivars, and environmental conditions may be possible if cultivars are selected for their responsiveness across multiple bacterial isolates and in multiple growing environments. Overall, this study indicates that non-native endophytes could be considered for the development of biofertilizers with effectiveness across crop species.

Verified
Journal Article
Open access
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GVGrace Vinarao
Grace Vinarao
KGKrishna Ghimire
Krishna Ghimire
DHDonna K Harris
Donna K Harris
Field pea, a key pulse crop for sustainable agriculture, faces significant production challenges due to drought, exacerbated by extreme climatic changes. This study evaluated 17 field pea plant introductions (PIs) and two commercial varieties under greenhouse conditions to assess their performance, determine the relationships between agronomic traits and grain yield (GY), and identify genotypes with stable yields under drought stress. Two water treatments were applied: 100% field capacity for well-watered (WW) and 60% field capacity for water deficit (WD) conditions, with drought stress imposed 21 days after planting. Significant genotypic variation was observed under both conditions. Water deficit significantly reduced GY, the number of pods per plant (NPP), plant height (PH), aboveground dry vegetative biomass (ADVB), and days to maturity (DTM) while increasing stomatal density on both adaxial (SD.ADX) and abaxial leaf surfaces (SD.ABX). Traits associated with GY in WW, such as NPP, PH, ADVB, and SD.ADX, showed stronger correlations under WD, with DTM being significantly associated with GY only in WD. Top-performing genotypes in both conditions exhibited higher pod numbers, increased aboveground dry vegetative biomass, late maturity, and lower adaxial stomatal density. Notably, PI 272215 was identified as a top performer under both conditions, with an 88% yield stability index. PI 180702 demonstrated comparable performance to PI 272215 but with no yield loss under the same conditions. These findings can be used for future field pea breeding programs aimed at developing drought-tolerant field pea varieties.