Kristoffer Knutsen Wickstrøm

Dr. Kristoffer Knutsen Wickstrøm

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 February 2020 in Medical Image Analysis
Verified
Journal Article
Open access
KWKristoffer Knutsen Wickstrøm
Kristoffer Knutsen Wickstrøm
MKMichael Kampffmeyer
Michael Kampffmeyer
RJRobert Jenssen
Robert Jenssen
Colorectal polyps are known to be potential precursors to colorectal cancer, which is one of the leading causes of cancer-related deaths on a global scale. Early detection and prevention of colorectal cancer is primarily enabled through manual screenings, where the intestines of a patient is visually examined. Such a procedure can be challenging and exhausting for the person performing the screening. This has resulted in numerous studies on designing automatic systems aimed at supporting physicians during the examination. Recently, such automatic systems have seen a significant improvement as a result of an increasing amount of publicly available colorectal imagery and advances in deep learning research for object image recognition. Specifically, decision support systems based on Convolutional Neural Networks (CNNs) have demonstrated state-of-the-art performance on both detection and segmentation of colorectal polyps. However, CNN-based models need to not only be precise in order to be helpful in a medical context. In addition, interpretability and uncertainty in predictions must be well understood. In this paper, we develop and evaluate recent advances in uncertainty estimation and model interpretability in the context of semantic segmentation of polyps from colonoscopy images. Furthermore, we propose a novel method for estimating the uncertainty associated with important features in the input and demonstrate how interpretability and uncertainty can be modeled in DSSs for semantic segmentation of colorectal polyps. Results indicate that deep models are utilizing the shape and edge information of polyps to make their prediction. Moreover, inaccurate predictions show a higher degree of uncertainty compared to precise predictions.

14 February 2022 in Pattern Recognition Letters
Verified
Journal Article
Open access
KWKristoffer Knutsen Wickstrøm
Kristoffer Knutsen Wickstrøm
MKMichael Kampffmeyer
Michael Kampffmeyer
KMKarl Øyvind Mikalsen
Karl Øyvind Mikalsen
RJRobert Jenssen
Robert Jenssen

13 February 2020 in IEEE Transactions on Neural Networks and Learning Systems
Verified
Journal Article
Closed access
Shujian YuShujian Yu
Shujian Yu
KWKristoffer Knutsen Wickstrøm
Kristoffer Knutsen Wickstrøm
RJRobert Jenssen
Robert Jenssen
Jose PrincipeJose Principe
Jose Principe
A novel functional estimator for Rényi's α-entropy and its multivariate extension was recently proposed in terms of the normalized eigenspectrum of a Hermitian matrix of the projected data in a reproducing kernel Hilbert space (RKHS). However, the utility and possible applications of these new estimators are rather new and mostly unknown to practitioners. In this brief, we first show that this estimator enables straightforward measurement of information flow in realistic convolutional neural networks (CNNs) without any approximation. Then, we introduce the partial information decomposition (PID) framework and develop three quantities to analyze the synergy and redundancy in convolutional layer representations. Our results validate two fundamental data processing inequalities and reveal more inner properties concerning CNN training.

7 December 2020 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
KWKristoffer Knutsen Wickstrøm
Kristoffer Knutsen Wickstrøm
KMKarl Oyvind Mikalsen
Karl Oyvind Mikalsen
MKMichael Kampffmeyer
Michael Kampffmeyer
ARArthur Revhaug
Arthur Revhaug
RJRobert Jenssen
Robert Jenssen
Deep learning-based support systems have demonstrated encouraging results in numerous clinical applications involving the processing of time series data. While such systems often are very accurate, they have no inherent mechanism for explaining what influenced the predictions, which is critical for clinical tasks. However, existing explainability techniques lack an important component for trustworthy and reliable decision support, namely a notion of uncertainty. In this paper, we address this lack of uncertainty by proposing a deep ensemble approach where a collection of DNNs are trained independently. A measure of uncertainty in the relevance scores is computed by taking the standard deviation across the relevance scores produced by each model in the ensemble, which in turn is used to make the explanations more reliable. The class activation mapping method is used to assign a relevance score for each time step in the time series. Results demonstrate that the proposed ensemble is more accurate in locating relevant time steps and is more consistent across random initializations, thus making the model more trustworthy. The proposed methodology paves the way for constructing trustworthy and dependable support systems for processing clinical time series for healthcare related tasks.

13 October 2020 in Journal of Geophysical Research: Space Physics
Verified
Journal Article
Open access
PDF file
AKAndreas Kvammen
Andreas Kvammen
KWKristoffer Knutsen Wickstrøm
Kristoffer Knutsen Wickstrøm
DMDerek McKay
Derek McKay
NPNoora Partamies
Noora Partamies
Results from a study of automatic aurora classification using machine learning techniques are presented. The aurora is the manifestation of physical phenomena in the ionosphere‐magnetosphere environment. Automatic classification of millions of auroral images from the Arctic and Antarctic is therefore an attractive tool for developing auroral statistics and for supporting scientists to study auroral images in an objective, organized, and repeatable manner. Although previous studies have presented tools for detecting aurora, there has been a lack of tools for classifying aurora into subclasses with a high precision (>90%). This work considers seven auroral subclasses: breakup, colored, arcs, discrete, patchy, edge, and faint. Six different deep neural network architectures have been tested along with the well‐known classification algorithms: k‐nearest neighbor (KNN) and a support vector machine (SVM). A set of clean nighttime color auroral images, without clearly ambiguous auroral forms, moonlight, twilight, clouds, and so forth, were used for training and testing the classifiers. The deep neural networks generally outperformed the KNN and SVM methods, and the ResNet‐50 architecture achieved the highest performance with an average classification precision of 92%.

1 September 2018
Verified
Conference Paper
Closed access
KWKristoffer Knutsen Wickstrøm
Kristoffer Knutsen Wickstrøm
MKMichael Kampffmeyer
Michael Kampffmeyer
RJRobert Jenssen
Robert Jenssen
Convolutional Neural Networks (CNNs) are propelling advances in a range of different computer vision tasks such as object detection and object segmentation. Their success has motivated research in applications of such models for medical image analysis. If CNN-based models are to be helpful in a medical context, they need to be precise, interpretable, and uncertainty in predictions must be well understood. In this paper, we develop and evaluate recent advances in uncertainty estimation and model interpretability in the context of semantic segmentation of polyps from colonoscopy images. We evaluate and enhance several architectures of Fully Convolutional Networks (FCNs) for semantic segmentation of colorectal polyps and provide a comparison between these models. Our highest performing model achieves a 76.06% mean IOU accuracy on the EndoScene dataset, a considerable improvement over the previous state-of-the-art.