We propose a deep Convolutional Neural Network (CNN) for land cover mapping in remote sensing images, with a focus on urban areas. In remote sensing, class imbalance represents often a problem for tasks like land cover mapping, as small objects get less prioritised in an effort to achieve the best overall accuracy. We propose a novel approach to achieve high overall accuracy, while still achieving good accuracy for small objects. Quantifying the uncertainty on a pixel scale is another challenge in remote sensing, especially when using CNNs. In this paper we use recent advances in measuring uncertainty for CNNs and evaluate their quality both qualitatively and quantitatively in a remote sensing context. We demonstrate our ideas on different deep architectures including patch-based and so-called pixel-to-pixel approaches, as well as their combination, by classifying each pixel in a set of aerial images covering Vaihingen, Germany. The results show that we obtain an overall classification accuracy of 87%. The corresponding F1- score for the small object class "car" is 80.6%, which is higher than state-of-the art for this dataset.

Colorectal polyps are known to be potential precursors to colorectal cancer, which is one of the leading causes of cancer-related deaths on a global scale. Early detection and prevention of colorectal cancer is primarily enabled through manual screenings, where the intestines of a patient is visually examined. Such a procedure can be challenging and exhausting for the person performing the screening. This has resulted in numerous studies on designing automatic systems aimed at supporting physicians during the examination. Recently, such automatic systems have seen a significant improvement as a result of an increasing amount of publicly available colorectal imagery and advances in deep learning research for object image recognition. Specifically, decision support systems based on Convolutional Neural Networks (CNNs) have demonstrated state-of-the-art performance on both detection and segmentation of colorectal polyps. However, CNN-based models need to not only be precise in order to be helpful in a medical context. In addition, interpretability and uncertainty in predictions must be well understood. In this paper, we develop and evaluate recent advances in uncertainty estimation and model interpretability in the context of semantic segmentation of polyps from colonoscopy images. Furthermore, we propose a novel method for estimating the uncertainty associated with important features in the input and demonstrate how interpretability and uncertainty can be modeled in DSSs for semantic segmentation of colorectal polyps. Results indicate that deep models are utilizing the shape and edge information of polyps to make their prediction. Moreover, inaccurate predictions show a higher degree of uncertainty compared to precise predictions.

Image translation with convolutional neural networks has recently been used as an approach to multimodal change detection. Existing approaches train the networks by exploiting supervised information of the change areas, which, however, is not always available. A main challenge in the unsupervised problem setting is to avoid that change pixels affect the learning of the translation function. We propose two new network architectures trained with loss functions weighted by priors that reduce the impact of change pixels on the learning objective. The change prior is derived in an unsupervised fashion from relational pixel information captured by domain-specific affinity matrices. Specifically, we use the vertex degrees associated with an absolute affinity difference matrix and demonstrate their utility in combination with cycle consistency and adversarial training. The proposed neural networks are compared with the state-of-the-art algorithms. Experiments conducted on three real data sets show the effectiveness of our methodology.

Recent work has shown that label-efficient few-shot learning through self-supervision can achieve promising medical image segmentation results. However, few-shot segmentation models typically rely on prototype representations of the semantic classes, resulting in a loss of local information that can degrade performance. This is particularly problematic for the typically large and highly heterogeneous background class in medical image segmentation problems. Previous works have attempted to address this issue by learning additional prototypes for each class, but since the prototypes are based on a limited number of slices, we argue that this ad-hoc solution is insufficient to capture the background properties. Motivated by this, and the observation that the foreground class (e.g., one organ) is relatively homogeneous, we propose a novel anomaly detection-inspired approach to few-shot medical image segmentation in which we refrain from modeling the background explicitly. Instead, we rely solely on a single foreground prototype to compute anomaly scores for all query pixels. The segmentation is then performed by thresholding these anomaly scores using a learned threshold. Assisted by a novel self-supervision task that exploits the 3D structure of medical images through supervoxels, our proposed anomaly detection-inspired few-shot medical image segmentation model outperforms previous state-of-the-art approaches on two representative MRI datasets for the tasks of abdominal organ segmentation and cardiac segmentation.

Image translation with convolutional autoencoders has recently been used as an approach to multimodal change detection (CD) in bitemporal satellite images. A main challenge is the alignment of the code spaces by reducing the contribution of change pixels to the learning of the translation function. Many existing approaches train the networks by exploiting supervised information of the change areas, which, however, is not always available. We propose to extract relational pixel information captured by domain-specific affinity matrices at the input and use this to enforce alignment of the code spaces and reduce the impact of change pixels on the learning objective. A change prior is derived in an unsupervised fashion from pixel pair affinities that are comparable across domains. To achieve code space alignment, we enforce pixels with similar affinity relations in the input domains to be correlated also in code space. We demonstrate the utility of this procedure in combination with cycle consistency. The proposed approach is compared with the state-of-the-art machine learning and deep learning algorithms. Experiments conducted on four real and representative datasets show the effectiveness of our methodology.

Land cover classification of remote sensing images is a challenging task due to limited amounts of annotated data, highly imbalanced classes, frequent incorrect pixel-level annotations, and an inherent complexity in the semantic segmentation task. In this article, we propose a novel architecture called the dense dilated convolutions' merging network (DDCM-Net) to address this task. The proposed DDCM-Net consists of dense dilated image convolutions merged with varying dilation rates. This effectively utilizes rich combinations of dilated convolutions that enlarge the network's receptive fields with fewer parameters and features compared with the state-of-the-art approaches in the remote sensing domain. Importantly, DDCM-Net obtains fused local- and global-context information, in effect incorporating surrounding discriminative capability for multiscale and complex-shaped objects with similar color and textures in very high-resolution aerial imagery. We demonstrate the effectiveness, robustness, and flexibility of the proposed DDCM-Net on the publicly available ISPRS Potsdam and Vaihingen data sets, as well as the DeepGlobe land cover data set. Our single model, trained on three-band Potsdam and Vaihingen data sets, achieves better accuracy in terms of both mean intersection over union (mIoU) and F1-score compared with other published models trained with more than three-band data. We further validate our model on the DeepGlobe data set, achieving state-of-the-art result 56.2% mIoU with much fewer parameters and at a lower computational cost compared with related recent work.