The HyPlant imaging spectrometer is a high-performance airborne instrument consisting of two sensor modules. The DUAL module records hyperspectral data in the spectral range from 400–2500 nm, which is useful to derive biochemical and structural plant properties. In parallel, the FLUO module acquires data in the red and near infrared range (670–780 nm), with a distinctly higher spectral sampling interval and finer spectral resolution. The technical specifications of HyPlant FLUO allow for the retrieval of sun-induced chlorophyll fluorescence (SIF), a small signal emitted by plants, which is directly linked to their photosynthetic efficiency. The combined use of both HyPlant modules opens up new opportunities in plant science. The processing of HyPlant image data, however, is a rather complex procedure, and, especially for the FLUO module, a precise characterization and calibration of the sensor is of utmost importance. The presented study gives an overview of this unique high-performance imaging spectrometer, introduces an automatized processing chain, and gives an overview of the different processing steps that must be executed to generate the final products, namely top of canopy (TOC) radiance, TOC reflectance, reflectance indices and SIF maps.

Advances in high-performance computer resources and exploitation of high-density terrestrial laser scanning (TLS) data allow for reconstruction of close-to-reality 3D forest scenes for use in canopy radiative transfer models. Consequently, our main objectives were (i) to reconstruct 3D representation of Norway spruce (Picea abies) trees by deriving distribution of woody and foliage elements from TLS and field structure data and (ii) to use the reconstructed 3D spruce representations for evaluation of the effects of canopy structure on forest reflectance simulated in the Discrete Anisotropic Radiative Transfer (DART) model. Data for this study were combined from two spruce research sites located in the mountainous areas of the Czech Republic. The canopy structure effects on simulated top-of-canopy reflectance were evaluated for four scenarios (10 × 10 m scenes with 10 trees), ranging from geometrically simple to highly detailed architectures. First scenario A used predefined simple tree crown shapes filled with a turbid medium with simplified trunks and branches. Other three scenarios used the reconstructed 3D spruce representations with B detailed needle shoots transformed into turbid medium, C with simplified shoots retained as facets, and D with detailed needle shoots retained as facets D. For the first time, we demonstrated the capability of the DART model to simulate reflectance of complex coniferous forest scenes up to the level of a single needle (scenario D). Simulated bidirectional reflectance factors extracted for each scenario were compared with actual airborne hyperspectral and space-borne Sentinel-2 MSI reflectance data. Scenario A yielded the largest differences from the remote sensing observations, mainly in the visible and NIR regions, whereas scenarios B, C, and D produced similar results revealing a good agreement with the remote sensing data. When judging the computational requirements for reflectance simulations in DART, scenario B can be considered as most operational spruce forest representation, because the transformation of 3D shoots in turbid medium reduces considerably the simulation time and hardware requirements.

This study presents a complex empirical image-based radiometric calibration method for a Tetracam μMCA multispectral frame camera. The workflow is based on a laboratory investigation of the camera’s radiometric properties combined with vicarious atmospheric correction using an empirical line. The effect of the correction is demonstrated on out-of-laboratory field campaign data. The dark signal noise behaviour was investigated based on the exposure time and ambient temperature. The vignette effect coupled with nonuniform quantum efficiency was studied with respect to changing exposure times and illuminations to simulate field campaign conditions. The efficiency of the proposed correction workflow was validated by comparing the reflectance values that were extracted from a fully corrected image and the raw data of the reference spectroscopy measurement using three control targets. The Normalized Root Mean Square Errors (NRMSE) of all separate bands ranged from 0.24 to 2.10%, resulting in a significant improvement of the NRMSE compared to the raw data. The results of a field experiment demonstrated that the proposed correction workflow significantly improves the quality of multispectral imagery. The workflow was designed to be applicable to the out-of-laboratory conditions of UAV imaging campaigns in variable natural conditions and other types of multiarray imaging systems.

Synergies of optical, thermal and laser scanning remotely sensed data provide valuable information to study the structure and functioning of terrestrial ecosystems. One of the few fully operational airborne multi-sensor platforms for ecosystem research in Europe is the Flying Laboratory of Imaging Systems (FLIS), operated by the Global Change Research Institute of the Czech Academy of Sciences. The system consists of three commercial imaging spectroradiometers. One spectroradiometer covers the visible and near-infrared, and the other covers the shortwave infrared part of the electromagnetic spectrum. These two provide full spectral data between 380–2450 nm, mainly for the assessment of biochemical properties of vegetation, soil and water. The third spectroradiometer covers the thermal long-wave infrared part of the electromagnetic spectrum and allows for mapping of surface emissivity and temperature properties. The fourth instrument onboard is the full waveform laser scanning system, which provides data on landscape orography and 3D structure. Here, we describe the FLIS design, data acquisition plan and primary data pre-processing. The synchronous acquisition of multiple data sources provides a complex analytical and data framework for the assessment of vegetation ecosystems (such as plant species composition, plant functional traits, biomass and carbon stocks), as well as for studying the role of greenery or blue-green infrastructure on the thermal behaviour of urban systems. In addition, the FLIS airborne infrastructure supports calibration and validation activities for existing and upcoming satellite missions (e.g., FLEX, PRISMA).