Microorganisms can potentially colonise volcanic rocks using the chemical energy in reduced gases such as methane, hydrogen (H2) and carbon monoxide (CO). In this study, we analysed soil metagenomes from Chilean volcanic soils, representing three different successional stages with ages of 380, 269 and 63 years, respectively. A total of 19 metagenome-assembled genomes (MAGs) were retrieved from all stages with a higher number observed in the youngest soil (1640: 2 MAGs, 1751: 1 MAG, 1957: 16 MAGs). Genomic similarity indices showed that several MAGs had amino-acid identity (AAI) values >50% to the phyla Actinobacteria, Acidobacteria, Gemmatimonadetes, Proteobacteria and Chloroflexi. Three MAGs from the youngest site (1957) belonged to the class Ktedonobacteria (Chloroflexi). Complete cellular functions of all the MAGs were characterised, including carbon fixation, terpenoid backbone biosynthesis, formate oxidation and CO oxidation. All 19 environmental genomes contained at least one gene encoding a putative carbon monoxide dehydrogenase (CODH). Three MAGs had form I coxL operon (encoding the large subunit CO-dehydrogenase). One of these MAGs (MAG-1957-2.1, Ktedonobacterales) was highly abundant in the youngest soil. MAG-1957-2.1 also contained genes encoding a [NiFe]-hydrogenase and hyp genes encoding accessory enzymes and proteins. Little is known about the Ktedonobacterales through cultivated isolates, but some species can utilise H2 and CO for growth. Our results strongly suggest that the remote volcanic sites in Chile represent a natural habitat for Ktedonobacteria and they may use reduced gases for growth.
This study was conducted to evaluate the effect of compost produced with agricultural residues and oat-based biochar, iron oxide and halloysite nanoparticles as additives of the process of composting on soil chemical properties, nutrient status and growth of ryegrass Lolium perenne L. For this, a 90-day mesocosm experiment was carried out under greenhouse conditions. Bare soil and a basal fertilization treatment were compared to soils amended with nonadditive compost (NA compost), compost supplied with oat-based biochar (Bioch compost), iron oxide nanoparticles (Fe compost), and halloysite nanoparticles (Ha compost). Compost supplied with nanoparticles and biochar combined were also considered. The incorporation of compost with or without additives increased the content of total C and N in soil, with N diminishing (total and mineral forms) and C/N modifications after 90 days. The addition of compost and co-composted treatments also increased the total contents of main nutrients such as Ca, K, P and S. Furthermore, the supply of additives into composting did not increase the concentration of trace toxic elements. At the end of the experiment, plant biomass increased by the addition of the different organic amendments, with the highest shoot biomass in soils amended with compost supplied with nanoparticles. These results suggest that the addition of compost based on agricultural residues with additives such as halloysite or biochar improves chemical properties and nutritional status of soil that favor and increase plant growth of Lollium perenne stablished in soils from the Mediterranean Region.
1 January 2015 in Journal of Soil Science and Plant Nutrition
Greenhouse gas (GHG) emissions and their consequent effect on global warming are an issue of global environmental concern. Increased carbon (C) stabilization and sequestration in soil organic matter (SOM) is one of the ways to mitigate these emissions. Here we evaluated the role of nanoclays isolated from soil on C stabilization in both a C rich Andisols and C depleted Cambisols. Nanoclays were analyzed for size and morphology by transmission electron microscopy, for elemental composition and molecular composition using pyrolysis-GC/MS. Moreover, nanoclays were treated with H2O2 to isolate stable SOM associated with them. Our result showed better nanoclay extraction efficiency and higher nanoclay yield for Cambisol compared to Andisols, probably related to their low organic matter content. Nanoclay fractions from both soils were different in size, morphology, surface reactivity and SOM content. Nanoclays in Andisols sequester around 5-times more C than Cambisols, and stabilized 6 to 8-times more C than Cambisols nanoclay after SOM chemical oxidation. Isoelectric points and surface charge of nanoclays extracted from the two soils was very different. However, the chemical reactivity of the nanoclay SOM was similar, illustrating their importance for C sequestration. Generally, the precise C stabilization mechanisms of both soils may be different, with nanoscale aggregation being more important in Andisols. We can conclude that independent of the soil type and mineralogy the nanoclay fraction may play an important role in C sequestration and stabilization in soil-plant systems
Expansion of farmland with food production as a major service has been largely associated with conversion of natural ecosystems like the Amazon and Savanna into new agricultural land