David Sarrut

Dr. David Sarrut

orcid

Research Focus & Metrics

Academic Career Length

30Years (1997-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 January 2011 in Physics in Medicine & Biology
Verified
Journal Article
Closed access
SJS Jan
S Jan
DBD Benoit
D Benoit
EBE Becheva
E Becheva
TCT Carlier
T Carlier
FCF Cassol
F Cassol
IBIrene Buvat
Irene Buvat
GATE (Geant4 Application for Emission Tomography) is a Monte Carlo simulation platform developed by the OpenGATE collaboration since 2001 and first publicly released in 2004. Dedicated to the modelling of planar scintigraphy, single photon emission computed tomography (SPECT) and positron emission tomography (PET) acquisitions, this platform is widely used to assist PET and SPECT research. A recent extension of this platform, released by the OpenGATE collaboration as GATE V6, now also enables modelling of x-ray computed tomography and radiation therapy experiments. This paper presents an overview of the main additions and improvements implemented in GATE since the publication of the initial GATE paper (Jan et al 2004 Phys. Med. Biol. 49 4543-61). This includes new models available in GATE to simulate optical and hadronic processes, novelties in modelling tracer, organ or detector motion, new options for speeding up GATE simulations, examples illustrating the use of GATE V6 in radiotherapy applications and CT simulations, and preliminary results regarding the validation of GATE V6 for radiation therapy applications. Upon completion of extensive validation studies, GATE is expected to become a valuable tool for simulations involving both radiotherapy and imaging.

12 May 2014 in Medical Physics
Verified
Journal Article
Closed access
DSDavid Sarrut
David Sarrut
MBManuel Bardiès
Manuel Bardiès
NBNicolas Boussion
Nicolas Boussion
NFNicolas Freud
Nicolas Freud
SJSébastien Jan
Sébastien Jan
IBIrene Buvat
Irene Buvat

31 May 2011 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
KMKeelin Murphy
Keelin Murphy
BGBram van Ginneken
Bram van Ginneken
JRJoseph M. Reinhardt
Joseph M. Reinhardt
SKSven Kabus
Sven Kabus
Kai DingKai Ding
Kai Ding
JPJosien P. W. Pluim
Josien P. W. Pluim
EMPIRE10 (Evaluation of Methods for Pulmonary Image REgistration 2010) is a public platform for fair and meaningful comparison of registration algorithms which are applied to a database of intra patient thoracic CT image pairs. Evaluation of nonrigid registration techniques is a nontrivial task. This is compounded by the fact that researchers typically test only on their own data, which varies widely. For this reason, reliable assessment and comparison of different registration algorithms has been virtually impossible in the past. In this work we present the results of the launch phase of EMPIRE10, which comprised the comprehensive evaluation and comparison of 20 individual algorithms from leading academic and industrial research groups. All algorithms are applied to the same set of 30 thoracic CT pairs. Algorithm settings and parameters are chosen by researchers expert in the con figuration of their own method and the evaluation is independent, using the same criteria for all participants. All results are published on the EMPIRE10 website (http://empire10.isi.uu.nl). The challenge remains ongoing and open to new participants. Full results from 24 algorithms have been published at the time of writing. This paper details the organization of the challenge, the data and evaluation methods and the outcome of the initial launch with 20 algorithms. The gain in knowledge and future work are discussed.

24 March 2014 in Journal of Physics: Conference Series
Verified
Conference Paper
Open access
SRS Rit
S Rit
MOM Vila Oliva
M Vila Oliva
SBS Brousmiche
S Brousmiche
RLR Labarbe
R Labarbe
DSDavid Sarrut
David Sarrut
GSG C Sharp
G C Sharp

14 May 2021 in Physics in Medicine & Biology
Verified
Journal Article
Open access
PDF file
DSDavid Sarrut
David Sarrut
MBMateusz Bała
Mateusz Bała
MBManuel Bardiès
Manuel Bardiès
JBJulien Bert
Julien Bert
MCMaxime Chauvin
Maxime Chauvin
EREmilie Roncali
Emilie Roncali
Built on top of the Geant4 toolkit, GATE is collaboratively developed for more than 15 years to design Monte Carlo simulations of nuclear-based imaging systems. It is, in particular, used by researchers and industrials to design, optimize, understand and create innovative emission tomography systems. In this paper, we reviewed the recent developments that have been proposed to simulate modern detectors and provide a comprehensive report on imaging systems that have been simulated and evaluated in GATE. Additionally, some methodological developments that are not specific for imaging but that can improve detector modeling and provide computation time gains, such as Variance Reduction Techniques and Artificial Intelligence integration, are described and discussed.

17 December 2010 in Medical Physics
Verified
Journal Article
Closed access
JVJef Vandemeulebroucke
Jef Vandemeulebroucke
SRSimon Rit
Simon Rit
JKJan Kybic
Jan Kybic
PCPatrick Clarysse
Patrick Clarysse
DSDavid Sarrut
David Sarrut