Hazrat Ali

Dr. Hazrat Ali


Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
12 October 2018 in Journal of Medical Systems
Verified
Journal Article
Closed access
PDF file
Talha IqbalTalha Iqbal
Talha Iqbal
HAHazrat Ali
Hazrat Ali

9 June 2022 in Scientific Reports
Verified
Journal Article
Open access
PDF file
WAWaqar Ahmad
Waqar Ahmad
HAHazrat Ali
Hazrat Ali
ZSZubair Shah
Zubair Shah
SAShoaib Azmat
Shoaib Azmat
For medical image analysis, there is always an immense need for rich details in an image. Typically, the diagnosis will be served best if the fine details in the image are retained and the image is available in high resolution. In medical imaging, acquiring high-resolution images is challenging and costly as it requires sophisticated and expensive instruments, trained human resources, and often causes operation delays. Deep learning based super resolution techniques can help us to extract rich details from a low-resolution image acquired using the existing devices. In this paper, we propose a new Generative Adversarial Network (GAN) based architecture for medical images, which maps low-resolution medical images to high-resolution images. The proposed architecture is divided into three steps. In the first step, we use a multi-path architecture to extract shallow features on multiple scales instead of single scale. In the second step, we use a ResNet34 architecture to extract deep features and upscale the features map by a factor of two. In the third step, we extract features of the upscaled version of the image using a residual connection-based mini-CNN and again upscale the feature map by a factor of two. The progressive upscaling overcomes the limitation for previous methods in generating true colors. Finally, we use a reconstruction convolutional layer to map back the upscaled features to a high-resolution image. Our addition of an extra loss term helps in overcoming large errors, thus, generating more realistic and smooth images. We evaluate the proposed architecture on four different medical image modalities: (1) the DRIVE and STARE datasets of retinal fundoscopy images, (2) the BraTS dataset of brain MRI, (3) the ISIC skin cancer dataset of dermoscopy images, and (4) the CAMUS dataset of cardiac ultrasound images. The proposed architecture achieves superior accuracy compared to other state-of-the-art super-resolution architectures.

13 June 2023 in IEEE Access
Verified
Journal Article
Open access
Rizwan QureshiRizwan Qureshi
Rizwan Qureshi
MIMuhammad Irfan
Muhammad Irfan
HAHazrat Ali
Hazrat Ali
SKSaleem Khan
Saleem Khan
ANAditya Shekhar Nittala
Aditya Shekhar Nittala
Tanvir AlamTanvir Alam
Tanvir Alam
Data generated from sources such as wearable sensors, medical imaging, personal health records, pathology records, and public health organizations have resulted in a massive information increase in the medical sciences over the last decade. Advances in computational hardware, such as cloud computing, Graphical Processing Units (GPUs), and Tensor Processing Units (TPUs), provide the means to utilize these data. Consequently, many Artificial Intelligence (AI)-based methods have been developed to infer from large healthcare data. Here, we present an overview of recent progress in artificial intelligence and biosensors in medical and life sciences. We discuss the role of machine learning in medical imaging, precision medicine, and biosensors for the Internet of Things (IoT). We review the most recent advancements in wearable biosensing technologies that use AI to assist in monitoring bodily electro-physiological and electro-chemical signals and disease diagnosis, demonstrating the trend towards personalized medicine with highly effective, inexpensive, and precise point-of-care treatment. Furthermore, an overview of the advances in computing technologies, such as accelerated artificial intelligence, edge computing, and federated learning for medical data, are also documented. Finally, we investigate challenges in data-driven AI approaches, the potential issues that biosensors and IoT-based healthcare generate, and the distribution shifts that occur among different data modalities, concluding with an overview of future prospects.

3 June 2022 in Neural Computing and Applications
Verified
Journal Article
Open access
PDF file
MMMehreen Mubashar
Mehreen Mubashar
HAHazrat Ali
Hazrat Ali
CGChrister Grönlund
Christer Grönlund
SAShoaib Azmat
Shoaib Azmat
U-Net is a widely adopted neural network in the domain of medical image segmentation. Despite its quick embracement by the medical imaging community, its performance suffers on complicated datasets. The problem can be ascribed to its simple feature extracting blocks: encoder/decoder, and the semantic gap between encoder and decoder. Variants of U-Net (such as R2U-Net) have been proposed to address the problem of simple feature extracting blocks by making the network deeper, but it does not deal with the semantic gap problem. On the other hand, another variant UNET++ deals with the semantic gap problem by introducing dense skip connections but has simple feature extraction blocks. To overcome these issues, we propose a new U-Net based medical image segmentation architecture R2U++. In the proposed architecture, the adapted changes from vanilla U-Net are: (1) the plain convolutional backbone is replaced by a deeper recurrent residual convolution block. The increased field of view with these blocks aids in extracting crucial features for segmentation which is proven by improvement in the overall performance of the network. (2) The semantic gap between encoder and decoder is reduced by dense skip pathways. These pathways accumulate features coming from multiple scales and apply concatenation accordingly. The modified architecture has embedded multi-depth models, and an ensemble of outputs taken from varying depths improves the performance on foreground objects appearing at various scales in the images. The performance of R2U++ is evaluated on four distinct medical imaging modalities: electron microscopy, X-rays, fundus, and computed tomography. The average gain achieved in IoU score is 1.5 ± 0.37% and in dice score is 0.9 ± 0.33% over UNET++, whereas, 4.21 ± 2.72 in IoU and 3.47 ± 1.89 in dice score over R2U-Net across different medical imaging segmentation datasets.

4 June 2022 in Insights into Imaging
Verified
Journal Article
Open access
PDF file
HAHazrat Ali
Hazrat Ali
RBRafiul Biswas
Rafiul Biswas
FMFarida Mohsen
Farida Mohsen
USUzair Shah
Uzair Shah
AAAsma Alamgir
Asma Alamgir
ZSZubair Shah
Zubair Shah
The performance of artificial intelligence (AI) for brain MRI can improve if enough data are made available. Generative adversarial networks (GANs) showed a lot of potential to generate synthetic MRI data that can capture the distribution of real MRI. Besides, GANs are also popular for segmentation, noise removal, and super-resolution of brain MRI images. This scoping review aims to explore how GANs methods are being used on brain MRI data, as reported in the literature. The review describes the different applications of GANs for brain MRI, presents the most commonly used GANs architectures, and summarizes the publicly available brain MRI datasets for advancing the research and development of GANs-based approaches. This review followed the guidelines of PRISMA-ScR to perform the study search and selection. The search was conducted on five popular scientific databases. The screening and selection of studies were performed by two independent reviewers, followed by validation by a third reviewer. Finally, the data were synthesized using a narrative approach. This review included 139 studies out of 789 search results. The most common use case of GANs was the synthesis of brain MRI images for data augmentation. GANs were also used to segment brain tumors and translate healthy images to diseased images or CT to MRI and vice versa. The included studies showed that GANs could enhance the performance of AI methods used on brain MRI imaging data. However, more efforts are needed to transform the GANs-based methods in clinical applications.

17 August 2016 in Neural Computing and Applications
Verified
Journal Article
Closed access
PDF file
HAHazrat Ali
Hazrat Ali
STSon N. Tran
Son N. Tran
Emmanouil BenetosEmmanouil Benetos
Emmanouil Benetos
AGArtur S. D’aVila Garcez
Artur S. D’aVila Garcez