John N. Williams

Dr. John N. Williams

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 June 2009 in Diversity and Distributions
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Journal Article
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JWJohn N. Williams
John N. Williams
CSChangwan Seo
Changwan Seo
JTJames Thorne
James Thorne
JNJulie K. Nelson
Julie K. Nelson
SESusan Erwin
Susan Erwin
MSMark W. Schwartz
Mark W. Schwartz
Aim To evaluate a suite of species distribution models for their utility as predictors of suitable habitat and as tools for new population discovery of six rare plant species that have both narrow geographical ranges and specialized habitat requirements.Location The Rattlesnake Creek Terrane (RCT) of the Shasta‐Trinity National Forest in the northern California Coast Range of the United States.Methods We used occurrence records from 25 years of US Forest Service botanical surveys, environmental and remotely sensed climate data to model the distributions of the target species across the RCT. The models included generalized linear models (GLM), artificial neural networks (ANN), random forests (RF) and maximum entropy (ME). From the results we generated predictive maps that were used to identify areas of high probability occurrence. We made field visits to the top‐ranked sites to search for new populations of the target species.Results Random forests gave the best results according to area under the curve and Kappa statistics, although ME was in close agreement. While GLM and ANN also gave good results, they were less restrictive and more varied than RF and ME. Cross‐model correlations were the highest for species with the most records and declined with record numbers. Model assessment using a separate dataset confirmed that RF provided the best predictions of appropriate habitat. Use of RF output to prioritize search areas resulted in the discovery of 16 new populations of the target species.Main conclusions Species distribution models, such as RF and ME, which use presence data and information about the background matrix where species do not occur, may be an effective tool for new population discovery of rare plant species, but there does appear to be a lower threshold in the number of occurrences required to build a good model.

15 January 2023 in Ecosphere
Verified
Journal Article
Open access
JWJohn N. Williams
John N. Williams
HSHugh D. D Safford
Hugh D. D Safford
NEN. Enstice
N. Enstice
ZSZ. L. Steel
Z. L. Steel
APA. K. Paulson
A. K. Paulson
Although fire is a fundamental ecological process in western North American forests, climate warming and accumulating forest fuels due to fire suppression have led to wildfires that burn at high severity across larger fractions of their footprint than were historically typical. These trends have spiked upwards in recent years and are particularly pronounced in the Sierra Nevada–Southern Cascades ecoregion of California, USA, and neighboring states. We assessed annual area burned (AAB) and percentage of area burned at high and low‐to‐moderate severity for seven major forest types in this region from 1984 to 2020. We compared values for this period against estimates for the pre‐Euro‐American settlement (EAS) period prior to 1850 and against a previous study of trends from 1984 to 2009. Our results show that the total average AAB remained below pre‐EAS levels, but that gap is decreasing (i.e., ~14% of pre‐EAS for 1984–2009, but 39% for 2010–2020 [including ~150% in 2020]). Although the average AAB has remained low compared with pre‐EAS, both the average annual area burned at high severity (AAHS) and the percentage of wildfire area burned at high severity have increased rapidly. The percentage of area burned at high severity, which was already above pre‐EAS average for the 1984–2009 period, has continued to rise for five of seven forest types. Notably, between 2010 and 2020, the average AAHS exceeded the pre‐EAS average for the first time on record. By contrast, the percentage of area that burned at low‐to‐moderate severity decreased, particularly in the lower elevation oak and mixed conifer forest types. These findings underline how forests historically adapted to frequent low‐to‐moderate severity fire are being reshaped by novel proportions and extents of high‐severity burning. The shift toward a high‐severity‐dominated fire regime is associated with ecological disruptions, including changes in forest structure, species composition, carbon storage, wildlife habitat, ecosystem services, and resilience. Our results underscore the importance of finding a better balance between the current management focus on fire suppression and one that puts greater emphasis on proactive fuel reduction and increased forest resilience to climate change and ecological disturbance.

31 May 2012 in Population and Environment
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JWJohn N. Williams
John N. Williams

9 November 2011 in Carbon Balance and Management
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JWJohn N. Williams
John N. Williams
AHAllan Hollander
Allan Hollander
AOA Toby O'Geen
A Toby O'Geen
LTL Ann Thrupp
L Ann Thrupp
RHRobert Hanifin
Robert Hanifin
LJLouise Jackson
Louise Jackson
Quantification of ecosystem services, such as carbon (C) storage, can demonstrate the benefits of managing for both production and habitat conservation in agricultural landscapes. In this study, we evaluated C stocks and woody plant diversity across vineyard blocks and adjoining woodland ecosystems (wildlands) for an organic vineyard in northern California. Carbon was measured in soil from 44 one m deep pits, and in aboveground woody biomass from 93 vegetation plots. These data were combined with physical landscape variables to model C stocks using a geographic information system and multivariate linear regression. Field data showed wildlands to be heterogeneous in both C stocks and woody tree diversity, reflecting the mosaic of several different vegetation types, and storing on average 36.8 Mg C/ha in aboveground woody biomass and 89.3 Mg C/ha in soil. Not surprisingly, vineyard blocks showed less variation in above- and belowground C, with an average of 3.0 and 84.1 Mg C/ha, respectively. This research demonstrates that vineyards managed with practices that conserve some fraction of adjoining wildlands yield benefits for increasing overall C stocks and species and habitat diversity in integrated agricultural landscapes. For such complex landscapes, high resolution spatial modeling is challenging and requires accurate characterization of the landscape by vegetation type, physical structure, sufficient sampling, and allometric equations that relate tree species to each landscape. Geographic information systems and remote sensing techniques are useful for integrating the above variables into an analysis platform to estimate C stocks in these working landscapes, thereby helping land managers qualify for greenhouse gas mitigation credits. Carbon policy in California, however, shows a lack of focus on C stocks compared to emissions, and on agriculture compared to other sectors. Correcting these policy shortcomings could create incentives for ecosystem service provision, including C storage, as well as encourage better farm stewardship and habitat conservation.

31 October 2018 in Oecologia
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ARArturo Ramírez-Bautista
Arturo Ramírez-Bautista
JWJohn N. Williams
John N. Williams

16 February 2017 in Carbon Balance and Management
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Jorge Andres MorandeJorge Andres Morande
Jorge Andres Morande
CSChristine M. Stockert
Christine M. Stockert
GLGarrett C. Liles
Garrett C. Liles
JWJohn N. Williams
John N. Williams
DSDavid R. Smart
David R. Smart
JVJoshua Viers
Joshua Viers
Quantifying terrestrial carbon (C) stocks in vineyards represents an important opportunity for estimating C sequestration in perennial cropping systems. Considering 7.2 M ha are dedicated to winegrape production globally, the potential for annual C capture and storage in this crop is of interest to mitigate greenhouse gas emissions. In this study, we used destructive sampling to measure C stocks in the woody biomass of 15-year-old Cabernet Sauvignon vines from a vineyard in California’s northern San Joaquin Valley. We characterize C stocks in terms of allometric variation between biomass fractions of roots, aboveground wood, canes, leaves and fruits, and then test correlations between easy-to-measure variables such as trunk diameter, pruning weights and harvest weight to vine biomass fractions. Carbon stocks at the vineyard block scale were validated from biomass mounds generated during vineyard removal. Total vine C was estimated at 12.3 Mg C ha−1, of which 8.9 Mg C ha−1 came from perennial vine biomass. Annual biomass was estimated at 1.7 Mg C ha−1 from leaves and canes and 1.7 Mg C ha−1 from fruit. Strong, positive correlations were found between the diameter of the trunk and overall woody C stocks (R2 = 0.85), pruning weights and leaf and fruit C stocks (R2 = 0.93), and between fruit weight and annual C stocks (R2 = 0.96). Vineyard C partitioning obtained in this study provides detailed C storage estimations in order to understand the spatial and temporal distribution of winegrape C. Allometric equations based on simple and practical biomass and biometric measurements could enable winegrape growers to more easily estimate existing and future C stocks by scaling up from berries and vines to vineyard blocks.