Rana Badar Aziz

Mr. Rana Badar Aziz

Life science, Nanjing Agricultural University, NANJING, Nanjing, Jiangsu, China
orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
4 February 2025 in Horticulturae
Verified
Journal Article
Open access
PDF file
Sabir IqbalSabir Iqbal
Sabir Iqbal
Essam ElatafiEssam Elatafi
Essam Elatafi
SLShaonan Li
Shaonan Li
SAShahzad Ali
Shahzad Ali
Abdul HakeemAbdul Hakeem
Abdul Hakeem
JFJinggui Fang
Jinggui Fang
The present study scrutinized the influence of foliar application of methyl jasmonate on the physiochemical characteristics and antioxidant enzymes of two grapevine rootstocks, ‘SO4’ (high drought tolerance) and ‘101-14’ (low drought tolerance), under drought conditions. The grapevine seedlings were sprayed with methyl jasmonate at 100 µM at 3-day intervals throughout the 28-day drought stress period. The results showed that treating both rootstocks with methyl jasmonate greatly minimized the adverse effects of reactive oxygen species caused by drought. Specifically, methyl jasmonate substantially reduced levels of malondialdehyde, hydrogen peroxide, and ion leakage while increasing photosynthetic pigment levels, soluble carbohydrates, proline, protein, and total phenols content. Additionally, applying methyl jasmonate improved the action of antioxidant enzymes like superoxide dismutase, ascorbate peroxidase, and catalase. This made the membranes of leaves more solid during drought conditions. Methyl jasmonate treatment reduced oxidative damage and improved mineral element (P, K, Mg, Ca, Fe, and Zn) accumulation in the green leaves of treated plants as opposed to the drought-untreated plants. These results were more noticeable in ‘SO4’ compared to ‘101-14’ rootstocks. Based on these results, applying methyl jasmonate at 100 µM to the leaves of grapevines may be considered a novel strategy for mitigating water scarcity in the grapevine production system.

Verified
Journal Article
Open access
PDF file
RARana Badar Aziz
Rana Badar Aziz
JWJi Wei
Ji Wei
QWQiqi Wu
Qiqi Wu
SSSiyan Song
Siyan Song
HYHui Yang
Hui Yang
CWChen Wang
Chen Wang
Paclobutrazol (PAC) is a significant inhibitor of gibberellin biosynthesis that profoundly influences grape seed development (GSD) through the modulation of key molecular pathways. Here, we identified 6659 differentially expressed genes (DEGs) in GSD under PAC treatment, with 3601 up-regulated and 3058 down-regulated. An analysis of hormone-associated DEGs revealed that auxin-related genes (16) were the most up-regulated, followed by genes associated with brassinosteroid and ABA. In contrast, cytokinin- and gibberellin-related genes exhibited a suppressive response. PAC treatment also triggered extensive reprogramming of metabolic pathways, including 44 genes involved in starch and sucrose metabolism (24 up-regulated, 20 down-regulated), 101 cell wall-related genes (53 up-regulated, 48 down-regulated), and 110 transcription factors (77 up-regulated, 33 down-regulated). A cis-element analysis of the promoters of 76 hormone-responsive genes identified 14 types of hormone-responsive cis-elements, with ABRE being the most prevalent. Genes responsible for inactivating active hormones, such as ABA-VvPP2CA, IAA-VvGH3.1, and CK-VvARR9-1, were also identified. Concurrently, PAC negatively regulated hormone-active genes, including BR-VvXTH25, SA-VvTGA21-3, and JA-VvTIFY3B, leading to reduced levels of these hormones. PAC modulates GSD by mediating the dynamic balance of multi-hormone accumulations. Furthermore, development-related cis-elements such as the AACA-motif, AAGAA-motif, AC-I, AC-II, O2-site, as-1, CAT-box, CCAAT-box, circadian, GCN4-motif, RY-element, HD-Zip 1, HD-Zip 3, MSA-like, MYB-like sequence, MYB-binding site, and MYB recognition site, were found in key DEGs involved in starch and sucrose metabolism, cell wall remodeling, and epigenetic regulation. This indicates that these pathways are responsive to PAC modulation during GSD. Finally, we developed a comprehensive regulatory network to illustrate the PAC-mediated pathways involved in GSD. This network integrates multi-hormonal signaling, cell wall remodeling, epigenetic regulation, and transcription factors, highlighting PAC’s pivotal role in GSD. Our findings provide new insights into the complex mechanisms underlying PAC’s effects on grapevine development.

3 November 2022 in Plants
Verified
Journal Article
Open access
PDF file
SRShameem Raja
Shameem Raja
FFFozia Farhat
Fozia Farhat
ATArneeb Tariq
Arneeb Tariq
ZMZaffar Malik
Zaffar Malik
RARana Badar Aziz
Rana Badar Aziz
MEMohamed Elshikh
Mohamed Elshikh
Wastewater irrigation is a substitute for surface water scarcity, but traces of heavy metals (HMs) result in deleterious implications for soil, crop productivity, and in humans. Crops presenting HMs tolerance in genetic behavior are important for producing tolerant genotypes cultivated under wastewater irrigation. In the first part of this experiment, the results obtained previously are re-assessed in a hydroponic system and similar patterns and concentrations of HMs are found in different tomato organs. Following this trial, the tomato’s (Solanum lycopersicum L.) genetic basis of traits conferring HMs tolerance and yield are assessed when irrigated with waste or canal water. The North Carolina Mating II analysis illustrate the amount of gene action, nature, and inheritance pattern. Genetic components depict the involvement of non-additive, additive, and maternal genetic effects in HMs tolerance inheritance and yield. A noticeable increase in cumulative additive variance for the number of flowers (11,907.2) and the number of fruits (10,557.9) is recorded for tomato plants irrigated with wastewater, illustrating additive gene action. However, female and male (MSf/MSm) square ratios also show an association with cytoplasmic inheritance. For HMs tolerance, both additive and dominant variances appeared to be significant; cumulative dominance variance (4.83, 16.1, 4.69, 76.95, and 249.37) is higher compared to additive variance (0.18, 2.36, 0.19, −0.27, and 14.14) for nickel (Ni), chromium (Cr), lead (Pb), manganese (Mn), and zinc (Zn), respectively, indicating dominance gene action. The genotype RIOGRANDI accumulated and translocated fewer HMs to the aerial part of the plant compared to CLN-2418A and PB-017906, thus presenting a tolerant tomato genotype according to the hydroponic experiment. This also exhibited a differential pattern of gene action for HMs tolerance, suggesting that genotypes possess significant differences for HMs tolerance.

Verified
Journal Article
Open access
PDF file
FLFei Liu
Fei Liu
RARana Badar Aziz
Rana Badar Aziz
YWYumiao Wang
Yumiao Wang
XXXuxian Xuan
Xuxian Xuan
MYMucheng Yu
Mucheng Yu
CWChen Wang
Chen Wang
The formation of seedless traits is regulated by multiple factors. AGLs, which belong to the MADS-box family, were reported to be important regulators in this process; however, the underlying mechanism remains elusive. Here, we identified the VvAGL sub-family genes during the seed abortion process in seedless grapevine cv. ‘JingkeJing’ and found 40 differentially expressed VvAGL members and 1069 interacting proteins in this process. Interestingly, almost all members and their interacting proteins involved in the tryptophan metabolic pathway (K14486) and participated in the phytohormone signalling (KO04075) pathway, including the growth hormone (IAA), salicylic acid (SA), abscisic acid (ABA), cytokinin (CTK), and ethylene signalling pathways. The promoters of AGL sub-family genes contain cis-elements in response to hormones such as IAA, ABA, CTK, SA, and ETH, implying that they might respond to multi-hormone signals and involve in hormone signal transductions. Further expression analysis revealed VvAGL6-2, VvAGL11, VvAGL62-11, and VvAGL15 had the highest expression at the critical period of seed abortion, and there were positive correlations between ETH-VvAGL15-VvAGL6-2, ABA-VvAGL80, and SA-VvAGL62 in promoting seed abortion but negative feedback between IAA-VvAGL15-VvAGL6-2 and CTK-VvAGL11. Furthermore, many genes in the IAA, ABA, SA, CTK, and ETH pathways had a special expressional pattern in the seed, whereby we developed a regulatory network mediated by VvAGLs by responding to multihormonal crosstalk during grape seed abortion. Our findings provide new insights into the regulatory network of VvAGLs in multi-hormone signalling to regulate grape seed abortion, which could be helpful in the molecular breeding of high-quality seedless grapes.

Verified
Journal Article
Open access
PDF file
WCWang chen
Wang chen
PZPengcheng Zhao
Pengcheng Zhao
ZSZiwen Su
Ziwen Su
YHYuqing Huang
Yuqing Huang
YZYanping Zhang
Yanping Zhang
CWChen Wang
Chen Wang
Ethylene is one crucial phytohormone modulating plants’ organ development and ripening process, especially in fruits, but its action modes and discrepancies in non-climacteric grape and climacteric peach in these processes remain elusive. This work is focused on the action mode divergences of ethylene during the modulation of the organ development and ripening process in climacteric/non-climacteric plants. We characterized the key enzyme genes in the ethylene synthesis pathway, VvACO1 and PpACO1, and uncovered that their sequence structures are highly conserved, although their promoters exhibit important divergences in the numbers and types of the cis-elements responsive to hormones, implying various responses to hormone signals. Subsequently, we found the two have similar expression modes in vegetative organ development but inverse patterns in reproductive ones, especially in fruits. Then, VvACO1 and PpACO1 were further validated in promoting fruit ripening functions through their transient over-expression/RNAi-expression in tomatoes, of which the former possesses a weaker role than the latter in the fruit ripening process. Our findings illuminated the divergence in the action patterns and function traits of the key VvACO1/PpACO1 genes in the tissue development of climacteric/non-climacteric plants, and they have implications for further gaining insight into the interaction mechanism of ethylene signaling during the modulation of the organ development and ripening process in climacteric/non-climacteric plants.

8 November 2022 in Sarhad Journal of Agriculture
Verified
Journal Article
Open access
SKSamina Kausar
Samina Kausar
RARana Badar Aziz
Rana Badar Aziz
MWMuhammad Waseem
Muhammad Waseem
MAMuhammad Ahmad
Muhammad Ahmad
HSHamza Shafiq
Hamza Shafiq
Muhammad Usman ShoukatMuhammad Usman Shoukat
Muhammad Usman Shoukat
| Carotenoids are natural pigments, synthesized in photosynthetic organisms e.g., plants, bacteria, and algae, while carotenoids also be synthesized in some non-photosynthetic fungi or bacteria. The color gamut of carotenoids is from colorless to yellow, orange to red color, with variations reflected in many vegetables, fruits and flowers. They are categorized into two types: (1) xanthophylls and (2) carotenes. For instance, lycopene is found in tomatoes and watermelon, beta carotene in sweet carrots and potatoes, lutein in marigold flowers, and capsanthin and capsorubin in crimson pepper. Zeaxanthin is protective against scalp diseases, UV and skin redness. Lycopene is a bioactive component regarding the remedy of persistent sicknesses and lowering the chance of cardiovascular illnesses or cancer. The tremendous results of carotenoids in human food have prompted numerous efforts in plant genetic engineering to supply products with greater carotenoid accumulation, which isn’t always only beneficial for agriculture but also has consequences for scientific research in terms of organic, chemical, and molecular or genetic regulation. Carotenoid metabolism and its regulatory network is not only increasing plant “defense” but also enhance the quality of plants. In this overview article, we summarize the results of current research studies on carotenoid metabolism, knowledge about genetic information, and enzymes that are involved in carotenoid metabolism and regulation, underlying carotenoid accumulation, and factors that affect carotenoid regulation, and health benefits of carotenoids.