Josue Luiz Dalboni da Rocha

Dr. Josue Luiz Dalboni da Rocha

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2018 in NeuroImage: Clinical
Verified
Journal Article
Open access
MZMariana Zurita
Mariana Zurita
CMCristian Montalba
Cristian Montalba
TLTomás Labbé
Tomás Labbé
JCJuan Pablo Cruz
Juan Pablo Cruz
JRJosue Luiz Dalboni da Rocha
Josue Luiz Dalboni da Rocha
SUsergio uribe
sergio uribe
Multiple Sclerosis patients' clinical symptoms do not correlate strongly with structural assessment done with traditional magnetic resonance images. However, its diagnosis and evaluation of the disease's progression are based on a combination of this imaging analysis complemented with clinical examination. Therefore, other biomarkers are necessary to better understand the disease. In this paper, we capitalize on machine learning techniques to classify relapsing-remitting multiple sclerosis patients and healthy volunteers based on machine learning techniques, and to identify relevant brain areas and connectivity measures for characterizing patients. To this end, we acquired magnetic resonance imaging data from relapsing-remitting multiple sclerosis patients and healthy subjects. Fractional anisotropy maps, structural and functional connectivity were extracted from the scans. Each of them were used as separate input features to construct support vector machine classifiers. A fourth input feature was created by combining structural and functional connectivity. Patients were divided in two groups according to their degree of disability and, together with the control group, three group pairs were formed for comparison. Twelve separate classifiers were built from the combination of these four input features and three group pairs. The classifiers were able to distinguish between patients and healthy subjects, reaching accuracy levels as high as 89% ± 2%. In contrast, the performance was noticeably lower when comparing the two groups of patients with different levels of disability, reaching levels below 63% ± 5%. The brain regions that contributed the most to the classification were the right occipital, left frontal orbital, medial frontal cortices and lingual gyrus. The developed classifiers based on MRI data were able to distinguish multiple sclerosis patients and healthy subjects reliably. Moreover, the resulting classification models identified brain regions, and functional and structural connections relevant for better understanding of the disease.

28 February 2017 in Frontiers in Neuroscience
Verified
Journal Article
Open access
Ashkan EbadiAshkan Ebadi
Ashkan Ebadi
JRJosue Luiz Dalboni da Rocha
Josue Luiz Dalboni da Rocha
DNDushyanth B. Nagaraju
Dushyanth B. Nagaraju
FTFernanda Tovar-Moll
Fernanda Tovar-Moll
IBIvanei Bramati
Ivanei Bramati
PRParisa Rashidi
Parisa Rashidi
The human brain is a complex network of interacting regions. The grey matter regions of brain are interconnected by white matter tracts, together forming one integrative complex network. In this article, we report our investigation about the potential of applying brain connectivity patterns as an aid in diagnosing Alzheimer’s disease and Mild Cognitive Impairment. We performed pattern analysis of graph theoretical measures derived from Diffusion Tensor Imaging (DTI) data representing structural brain networks of 45 subjects, consisting of 15 patients of Alzheimer’s disease (AD), 15 patients of Mild Cognitive Impairment (MCI), and 15 healthy subjects (CT). We considered pair-wise class combinations of subjects, defining three separate classification tasks, i.e. AD-CT, AD-MCI, and CT-MCI, and used an ensemble classification module to perform the classification tasks. Our ensemble framework with feature selection shows a promising performance with classification accuracy of 83.3% for AD v/s MCI, 80% for AD v/s CT, and 70% for MCI v/s CT. Moreover, our findings suggest that AD can be related to graph measures abnormalities at Brodmann areas in the sensorimotor cortex and piriform cortex. In this way, node redundancy coefficient and load centrality in the primary motor cortex were recognized as good indicators of AD in contrast to MCI. In general, load centrality, betweenness centrality and closeness centrality were found to be the most relevant network measures, as they were the top identified features at different nodes. The present study can be regarded as a “proof of concept” about a procedure for the classification of MRI markers between AD dementia, MCI and normal old individuals, due to the small and not well defined groups of AD and MCI patients. Future studies with larger samples of subjects and more sophisticated patient exclusion criteria are necessary towards the development of a more precise technique for clinical diagnosis.

14 February 2020 in Scientific Reports
Verified
Journal Article
Open access
PDF file
JRJosue Luiz Dalboni da Rocha
Josue Luiz Dalboni da Rocha
IBIvanei Bramati
Ivanei Bramati
GCGabriel Coutinho
Gabriel Coutinho
FMFernanda Tovar Moll
Fernanda Tovar Moll
Ranganatha SitaramRanganatha Sitaram
Ranganatha Sitaram
Current treatments for Alzheimer’s disease are only symptomatic and limited to reduce the progression rate of the mental deterioration. Mild Cognitive Impairment, a transitional stage in which the patient is not cognitively normal but do not meet the criteria for specific dementia, is associated with high risk for development of Alzheimer’s disease. Thus, non-invasive techniques to predict the individual’s risk to develop Alzheimer’s disease can be very helpful, considering the possibility of early treatment. Diffusion Tensor Imaging, as an indicator of cerebral white matter integrity, may detect and track earlier evidence of white matter abnormalities in patients developing Alzheimer’s disease. Here we performed a voxel-based analysis of fractional anisotropy in three classes of subjects: Alzheimer’s disease patients, Mild Cognitive Impairment patients, and healthy controls. We performed Support Vector Machine classification between the three groups, using Fisher Score feature selection and Leave-one-out cross-validation. Bilateral intersection of hippocampal cingulum and parahippocampal gyrus (referred as parahippocampal cingulum) is the region that best discriminates Alzheimer’s disease fractional anisotropy values, resulting in an accuracy of 93% for discriminating between Alzheimer’s disease and controls, and 90% between Alzheimer’s disease and Mild Cognitive Impairment. These results suggest that pattern classification of Diffusion Tensor Imaging can help diagnosis of Alzheimer’s disease, specially when focusing on the parahippocampal cingulum.

18 September 2012 in Journal of Alzheimer’s Disease
Verified
Journal Article
Closed access
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GLGiulia Liberati
Giulia Liberati
JRJosue Luiz Dalboni da Rocha
Josue Luiz Dalboni da Rocha
LHLinda Van Der Heiden
Linda Van Der Heiden
ARAntonino Raffone
Antonino Raffone
NBNiels Birbaumer
Niels Birbaumer
Ranganatha SitaramRanganatha Sitaram
Ranganatha Sitaram
Brain-computer interfaces (BCIs) provide alternative methods for communicating and acting on the world, since messages or commands are conveyed from the brain to an external device without using the normal output pathways of peripheral nerves and mus

12 February 2025 in Cancers
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Journal Article
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JRJosue Luiz Dalboni da Rocha
Josue Luiz Dalboni da Rocha
JLJesyin Lai
Jesyin Lai
PPPankaj Pandey
Pankaj Pandey
PMPhyu Sin (Jessica) Mon Myat
Phyu Sin (Jessica) Mon Myat
ZLZachary Loschinskey
Zachary Loschinskey
Ranganatha SitaramRanganatha Sitaram
Ranganatha Sitaram
Background/Objectives: Artificial intelligence (AI) is transforming neuroimaging by enhancing diagnostic precision and treatment planning. However, its applications in pediatric cancer neuroimaging remain limited. This review assesses the current state, potential applications, and challenges of AI in pediatric neuroimaging for cancer, emphasizing the unique needs of the pediatric population. Methods: A comprehensive literature review was conducted, focusing on AI’s impact on pediatric neuroimaging through accelerated image acquisition, reduced radiation, and improved tumor detection. Key methods include convolutional neural networks for tumor segmentation, radiomics for tumor characterization, and several tools for functional imaging. Challenges such as limited pediatric datasets, developmental variability, ethical concerns, and the need for explainable models were analyzed. Results: AI has shown significant potential to improve imaging quality, reduce scan times, and enhance diagnostic accuracy in pediatric neuroimaging, resulting in improved accuracy in tumor segmentation and outcome prediction for treatment. However, progress is hindered by the scarcity of pediatric datasets, issues with data sharing, and the ethical implications of applying AI in vulnerable populations. Conclusions: To overcome current limitations, future research should focus on building robust pediatric datasets, fostering multi-institutional collaborations for data sharing, and developing interpretable AI models that align with clinical practice and ethical standards. These efforts are essential in harnessing the full potential of AI in pediatric neuroimaging and improving outcomes for children with cancer.

3 March 2020 in Scientific Reports
Verified
Journal Article
Open access
PDF file
JRJosue Luiz Dalboni da Rocha
Josue Luiz Dalboni da Rocha
PSPeter Schneider
Peter Schneider
JBJan Benner
Jan Benner
RSRoberta Santoro
Roberta Santoro
TATanja Atanasova
Tanja Atanasova
NGNarly Golestani
Narly Golestani
Auditory cortex volume and shape differences have been observed in the context of phonetic learning, musicianship and dyslexia. Heschl’s gyrus, which includes primary auditory cortex, displays large anatomical variability across individuals and hemispheres. Given this variability, manual labelling is the gold standard for segmenting HG, but is time consuming and error prone. Our novel toolbox, called ‘Toolbox for the Automated Segmentation of HG’ or TASH, automatically segments HG in brain structural MRI data, and extracts measures including its volume, surface area and cortical thickness. TASH builds upon FreeSurfer, which provides an initial segmentation of auditory regions, and implements further steps to perform finer auditory cortex delineation. We validate TASH by showing significant relationships between HG volumes obtained using manual labelling and using TASH, in three independent datasets acquired on different scanners and field strengths, and by showing good qualitative segmentation. We also present two applications of TASH, demonstrating replication and extension of previously published findings of relationships between HG volumes and (a) phonetic learning, and (b) musicianship. In sum, TASH effectively segments HG in a fully automated and reproducible manner, opening up a wide range of applications in the domains of expertise, disease, genetics and brain plasticity.