Saikiran Pendem

Dr. Saikiran Pendem


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 April 2024 in F1000Research
Verified
Journal Article
Open access
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Obhuli Chandran MadhivananObhuli Chandran Madhivanan
Obhuli Chandran Madhivanan
SPSaikiran Pendem
Saikiran Pendem
PSPriya Pattath Sankaran
Priya Pattath Sankaran
CCCijo Chacko
Cijo Chacko
D.Dr. Priyanka .
Dr. Priyanka .
RKRajagopal Kadavigere
Rajagopal Kadavigere
Background The most recent advances in Computed Tomography (CT) image reconstruction technology are Deep learning image reconstruction (DLIR) algorithms. Due to drawbacks in Iterative reconstruction (IR) techniques such as negative image texture and nonlinear spatial resolutions, DLIRs are gradually replacing them. However, the potential use of DLIR in Head and Chest CT has to be examined further. Hence, the purpose of the study is to review the influence of DLIR on Radiation dose (RD), Image noise (IN), and outcomes of the studies compared with IR and FBP in Head and Chest CT examinations. Methods We performed a detailed search in PubMed, Scopus, Web of Science, Cochrane Library, and Embase to find the articles reported using DLIR for Head and Chest CT examinations between 2017 to 2023. Data were retrieved from the short-listed studies using Preferred Reporting Items for Systematic Reviews and Meta-analysis (PRISMA) guidelines. Results Out of 196 articles searched, 15 articles were included. A total of 1292 sample size was included. 14 articles were rated as high and 1 article as moderate quality. All studies compared DLIR to IR techniques. 5 studies compared DLIR with IR and FBP. The review showed that DLIR improved IQ, and reduced RD and IN for CT Head and Chest examinations. Conclusions DLIR algorithm have demonstrated a noted enhancement in IQ with reduced IN for CT Head and Chest examinations at lower dose compared with IR and FBP. DLIR showed potential for enhancing patient care by reducing radiation risks and increasing diagnostic accuracy.

31 August 2024 in Radiography
Verified
Journal Article
Open access
PRPriyanka
Priyanka
RKRajagopal Kadavigere
Rajagopal Kadavigere
SNShailesh S Nayak
Shailesh S Nayak
Obhuli Chandran MadhivananObhuli Chandran Madhivanan
Obhuli Chandran Madhivanan
ASA. Shirlal
A. Shirlal
SPSaikiran Pendem
Saikiran Pendem
Magnetic Resonance Imaging (MRI) has revolutionized the diagnosis and treatment of musculoskeletal disorders. Parallel imaging (PI) and compressed sensing (CS) techniques reduce scan time, but higher acceleration factors decrease image quality. Artificial intelligence has enhanced MRI reconstructions by integrating deep learning algorithms. Therefore, the study aims to review the impact of Artificial intelligence-assisted compressed sensing (AI-CS) and acceleration factors on scan time and image quality in musculoskeletal MRI. Database searches were completed across PubMed, Scopus, CINAHL, Web of Science, Cochrane Library, and Embase to identify relevant articles focusing on the application of AI-CS in musculoskeletal MRI between 2022 and 2024. We utilized the Preferred Reporting Items for Systematic Reviews and Meta-analysis guidelines to extract data from the selected studies. Nine articles were included for the final review, with a total sample size of 730 participants. Of these, seven articles were rated as high, while two articles were considered to be of moderate quality. MRI examination with AI-CS showed scan time reduction of 18.9-38.8% for lumbar spine, 38-40% for shoulder, 54-75% for knee and 53-63% for ankle. AI-CS showed a significant reduction in scan time and improved image quality for 2D and 3D sequences in musculoskeletal MRI compared with PI and CS. Determining the optimal acceleration factor necessary to achieve images with higher image quality compared to traditional PI techniques is required before clinical implementation. Higher acceleration factors currently lead to reduced image scores, although advancements in AI-CS are expected to address the limitation. AI-CS in MRI improves patient care by shortening scan times, reducing patient discomfort and anxiety, and produces high quality images for accurate diagnosis.

5 December 2024 in Diagnostics
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Journal Article
Open access
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SNShailesh S Nayak
Shailesh S Nayak
SPSaikiran Pendem
Saikiran Pendem
GMGirish R. Menon
Girish R. Menon
Niranjana SampathilaNiranjana Sampathila
Niranjana Sampathila
PKPrakashini K
Prakashini K
Background: Brain tumors present a complex challenge in clinical oncology, where precise diagnosis and classification are pivotal for effective treatment planning. Radiomics, a burgeoning field in neuro-oncology, involves extracting and analyzing numerous quantitative features from medical images. This approach captures subtle spatial and textural information imperceptible to the human eye. However, implementation in clinical practice is still distant, and concerns have been raised regarding the methodological quality of radiomic studies. Methodology: A systematic literature search was performed to identify original articles focused on the use of radiomics for brain tumors from 2015 based on the inclusion and exclusion criteria. The radiomic features train machine learning models for glioma classification, and data are split into training and testing subsets to validate the model accuracy, reliability, and generalizability. The present study systematically reviews the status of radiomic studies concerning brain tumors, also using the radiomics quality score (RQS) to assess the quality of the methodology used in each study. Results: A systematic search of PubMed identified 300 articles, with 18 studies meeting the inclusion criteria for qualitative synthesis. These studies collectively demonstrate the potential of radiomics-based machine learning models in accurately distinguishing between glioma subtypes and grades. Various imaging modalities, including MRI, PET/CT, and advanced techniques like ASL and DTI, were utilized to extract radiomic features for analysis. Machine learning algorithms such as deep learning networks, support vector machines, random forests, and logistic regression were applied to develop predictive models. Conclusions: The present study indicates high accuracies in glioma classification, outperforming traditional imaging methods and inexperienced radiologists in some cases. Further validation and standardization efforts are warranted to facilitate the clinical integration of radiomics into routine practice, ultimately enhancing glioma management and patient outcomes. Open science practices: Machine learning using MRI radiomic features provides a simple, noninvasive, and cost-effective method for glioma classification, enhancing transparency, reproducibility, and collaboration within the scientific community.

10 October 2024 in F1000Research
Verified
Journal Article
Open access
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AMAli Muhaimil
Ali Muhaimil
SPSaikiran Pendem
Saikiran Pendem
Niranjana SampathilaNiranjana Sampathila
Niranjana Sampathila
PSPriya Pattath Sankaran
Priya Pattath Sankaran
KNKaushik Nayak
Kaushik Nayak
ASAbhijit Shirlal
Abhijit Shirlal
Background Low back pain (LBP), the primary cause of disability, is the most common musculoskeletal disorder globally and the primary cause of disability. Magnetic resonance imaging (MRI) studies are inconclusive and less sensitive for identifying and classifying patients with LBP. Hence, this study aimed to investigate the role of artificial intelligence (AI) models in the prediction of LBP using T2 weighted MRI image of the lumbar spine. Methods This was a prospective case-control study. A total of 200 MRI patients (100 cases and controls each) referred for lumbar spine and whole spine screening were included. The scans were performed using 3.0 Tesla MRI (United Imaging Healthcare). T2 weighted images of the lumbar spine were segmented to extract radiomic features. Machine learning (ML) models, such as random forest, decision tree, logistic regression, K-nearest neighbors, adaboost, and deep learning methods (DL), such as ResNet and GoogleNet, were used, and performance measures were calculated. Results Our study showed that Random forest and AdaBoost are the most reliable ML models for predicting LBP. Random forest showed high performance with area under curve (AUC) values from 0.83 to 0.88 across all lumbar vertebrae and L2-L3, L3-L4, and L4-L5 intervertebral discs (IVDs), with AUCs of 0.88 the highest at L5-S1 IVD (0.92). Adaboost demonstrated high performance at the L2-L5 vertebrae with AUC values of 0.82 to 0.90, with the highest AUC (0.97) at the L5-S1 IVD. Among the DL models, GoogleNet outperformed the other models at 30 epochs with an accuracy of 0.85, followed by ResNet 18 (30 epochs) with an accuracy of 0.84. Conclusion The study demonstrated that ML and DL models can effectively predict LBP from MRI T2 weighted image of the lumbar spine. ML and DL models could also enhance the diagnostic accuracy of LBP, potentially leading to better patient management and outcomes.

25 March 2025 in F1000Research
Verified
Journal Article
Open access
PDF file
SSSaroh S
Saroh S
SPSaikiran Pendem
Saikiran Pendem
PKPrakashini K
Prakashini K
SNShailesh S Nayak
Shailesh S Nayak
GMGirish R Menon
Girish R Menon
Divya BDivya B
Divya B
Introduction Meningioma is the most common brain tumor in adults. Magnetic resonance imaging (MRI) is the preferred imaging modality for assessing tumor outcomes. Radiomics, an advanced imaging technique, assesses tumor heterogeneity and identifies predictive markers, offering a non-invasive alternative to biopsies. Machine learning (ML) based radiomics models enhances diagnostic and prognostic accuracy of tumors. Comprehensive review on ML-based radiomics models for predicting meningioma recurrence and survival are lacking. Hence, the aim of the study is to summarize the performance measures of ML based radiomics models in the prediction of outcomes such as progression/recurrence (P/R) and overall survival analysis of meningioma. Methods Data bases such as Scopus, Web of Science, PubMed, and Embase were used to conduct a literature search in order to find pertinent original articles that concentrated on meningioma outcome prediction. PRISMA (Preferred reporting items for systematic reviews and meta-analysis) recommendations were used to extract data from selected studies. Results Eight articles were included in the study. MRI Radiomics-based models combined with clinical and pathological data showed strong predictive performance for meningioma recurrence. A decision tree model achieved 90% accuracy, outperforming an apparent diffusion coefficient (ADC) based model (83%). A support vector machine (SVM) model reached an area under curve (AUC) of 0.80 with radiomic features, improving to 0.88 with ADC integration. A combined clinico-pathological radiomics model (CPRM) achieved an AUC of 0.88 in testing. Key predictors of recurrence include ADC values, radiomic scores, ki-67 index, and Simpson grading. For predicting overall survival analysis of meningioma, the combined clinicopathological and radiomic features achieved an AUC of 0.78. Conclusion Integrating radiomics with clinical and pathological data through ML models greatly improved the outcome prediction for meningioma. These ML models surpass conventional MRI in predicting meningioma recurrence and aggressiveness, providing crucial insights for personalized treatment and surgical planning.

1 February 2024 in F1000Research
Verified
Journal Article
Open access
PDF file
SMSudeepta Maiti
Sudeepta Maiti
SNShailesh S Nayak
Shailesh S Nayak
KHKarthikeya D Hebbar
Karthikeya D Hebbar
SPSaikiran Pendem
Saikiran Pendem
Background Breast cancer (BC) is one of the main causes of cancer-related mortality among women. For clinical management to help patients survive longer and spend less time on treatment, early and precise cancer identification and differentiation of breast lesions are crucial. To investigate the accuracy of radiomic features (RF) extracted from dynamic contrast-enhanced Magnetic Resonance Imaging (DCE MRI) for differentiating invasive ductal carcinoma (IDC) from invasive lobular carcinoma (ILC). Methods This is a retrospective study. The IDC of 30 and ILC of 28 patients from Dukes breast cancer MRI data set of The Cancer Imaging Archive (TCIA), were included. The RF were extracted from the DCE-MRI sequence using a 3D slicer. The relevance of RF for differentiating IDC from ILC was evaluated using the maximum relevance minimum redundancy (mRMR) and Mann-Whitney test. Receiver Operating Characteristic (ROC) curve analysis was performed to ascertain the accuracy of RF in distinguishing between IDC and ILC. Results Ten DCE MRI-based RFs used in our study showed a significant difference (p <0.001) between IDC and ILC. We noticed that DCE RF, such as Gray level run length matrix (GLRLM) gray level variance (sensitivity (SN) 97.21%, specificity (SP) 96.2%, area under curve (AUC) 0.998), Gray level co-occurrence matrix (GLCM) difference average (SN 95.72%, SP 96.34%, AUC 0.983), GLCM interquartile range (SN 95.24%, SP 97.31%, AUC 0.968), had the strongest ability to differentiate IDC and ILC. Conclusions MRI-based RF derived from DCE sequences can be used in clinical settings to differentiate malignant lesions of the breast, such as IDC and ILC, without requiring intrusive procedures.