Microplastics in agricultural soils may affect edible crops through root-zone and rhizosphere processes, making it necessary to evaluate polymer-specific crop responses and potential mitigation strategies. Here, garlic (Allium sativum L.) was exposed to polyvinyl chloride (PVC), polyethylene (PE), and polystyrene (PS) microplastics at 1000 mg kg⁻¹, with sodium silicate (Na₂SiO₃) applied at 0, 500, 1000, and 3000 mg kg⁻¹. Growth traits, root architecture, bulb quality, root surface morphology, transcriptomes, metabolomes, and rhizosphere metagenomes were analyzed. PVC, PE, and PS reduced bulb fresh weight by 8.9%, 18.8%, and 22.1%, respectively, compared with CK, indicating a common yield penalty but different polymer effects. Root responses were also polymer-dependent: PS increased total root length to 1484.84 cm, whereas PE and PS reduced root activity to 3.59 and 3.14 μg g⁻¹ FW h⁻¹, respectively. Na₂SiO₃ modified these responses in a dose- and polymer-dependent manner. PE1000 showed the highest total root length (1604.85 cm), while PE1000 and PS1000 increased root activity to 15.07 and 17.58 μg g⁻¹ FW h⁻¹, respectively. Transcriptomic analysis identified 6975, 3059, and 5587 expression-changed genes in PVC, PE, and PS compared with CK, while metabolomics detected 423, 861, and 852 differential metabolites, respectively. Integrated omics highlighted phenylpropanoid biosynthesis, glutathione metabolism, lipid metabolism, carbohydrate metabolism, and amino acid metabolism as major response pathways. Metagenomics showed broadly similar dominant phyla but treatment-related genus-level shifts. Overall, garlic responses to microplastic exposure were polymer-specific, and Na₂SiO₃ acted as a conditional modulator rather than a universal alleviation strategy.