Horseradish and soybean peroxidases (HRP and SBP, respectively) are useful biotechnological tools. HRP is often termed the classical plant heme peroxidase and although it has been studied for decades, our understanding has deepened since its cloning and subsequent expression, enabling numerous mutational and protein engineering studies. SBP, however, has been neglected until recently, despite offering a real alternative to HRP: SBP actually outperforms HRP in terms of stability and is now used in numerous biotechnological applications, including biosensors. Review of both is timely. This article summarizes and discusses the main insights into the structure and mechanism of HRP, with special emphasis on HRP mutagenesis, and outlines its use in a variety of applications. It also reviews the current knowledge and applications to date of SBP, particularly biosensors. The final paragraphs speculate on the future of plant heme-based peroxidases, with probable trends outlined and explored.
• Amycolatopsis mediterranei lipase (AML) exhibits cutinase-like structural features. • AML shows 60–70% sequence similarity to a few plastic degrading cutinases. • AML has the ability to degrade poly(caprolactone) and poly(butylene succinate).
1 January 2019 in Protein Expression and Purification
The production of high yields of soluble recombinant protein is one of the main objectives of protein biotechnology. Several factors, such as expression system, vector, host, media composition and induction conditions can influence recombinant protein yield. Identifying the most important factors for optimum protein expression may involve significant investment of time and considerable cost. To address this problem, statistical models such as Design of Experiments (DoE) have been used to optimise recombinant protein production. This review examines the application of DoE in the production of recombinant proteins in prokaryotic expression systems with specific emphasis on media composition and culture conditions. The review examines the most commonly used DoE screening and optimisation designs. It provides examples of DoE applied to optimisation of media and culture conditions.
Plastics play a crucial role in modern life, but their accumulation poses a serious threat to both the environment and human health. Due to their effects on the terrestrial and aquatic environment, it is essential to develop sustainable approaches to dispose of waste plastics. Traditional methods of plastic disposal, such as burning and landfilling, are problematic since they produce hazardous byproducts. Biodegradation is a potentially effective, eco-friendly approach which uses microbial consortia or isolated enzymes to break down plastic waste. Enzymes interact with plastic surfaces and hydrolyse the large polymer chains into smaller units. These byproducts can then be utilised as carbon sources by microbes, which are eventually converted into CO2 and water. This review explores the principal approaches to plastic degradation, with a focus on existing and emerging polymers made to be readily biodegradable. In addition, sustainable valorisation methods for converting plastic waste into valuable byproducts are considered. The implementation of a circular plastic economy is expected to lead to further development, including scaling up of efficient plastic bio-upcycling processes, which can serve to stimulate environmental waste removal and value-added use of post-consumer plastic streams.