Gregor Sommer

Dr. Gregor Sommer

orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2020 in Korean Journal of Radiology
Verified
Journal Article
Open access
PDF file
TWThomas Weikert
Thomas Weikert
LNLuca Andre Noordtzij
Luca Andre Noordtzij
JBJens Bremerich
Jens Bremerich
BSBram Stieltjes
Bram Stieltjes
VPVictor Parmar
Victor Parmar
ASAlexander Sauter
Alexander Sauter
Weikert T, et al. Korean J Radiol. 2020 Jul;21(7):891-899. https://doi.org/10.3348/kjr.2019.0653

1 March 2014 in European Journal of Radiology
Verified
Journal Article
Closed access
GSGregor Sommer
Gregor Sommer
JTJan Tremper
Jan Tremper
Marcel Koenigkam-SantosMarcel Koenigkam-Santos
Marcel Koenigkam-Santos
Stefan DelormeStefan Delorme
Stefan Delorme
NBNikolaus Becker
Nikolaus Becker
MPMichael Puderbach
Michael Puderbach

9 July 2012 in European Radiology
Verified
Journal Article
Closed access
PDF file
GSGregor Sommer
Gregor Sommer
MWMark Wiese
Mark Wiese
LWLeopold Winter
Leopold Winter
CLClaudia Lenz
Claudia Lenz
MKMarkus Klarhöfer
Markus Klarhöfer
JBJens Bremerich
Jens Bremerich

7 December 2017 in European Respiratory Journal
Verified
Journal Article
Closed access
PDF file
SNSylvia Nyilas
Sylvia Nyilas
GBGrzegorz Bauman
Grzegorz Bauman
GSGregor Sommer
Gregor Sommer
ESEnno Stranzinger
Enno Stranzinger
OPOrso Pusterla
Orso Pusterla
PLPhilipp Latzin
Philipp Latzin
Lung function tests are commonly used to monitor lung disease in cystic fibrosis (CF). While practical, they cannot locate the exact origin of functional impairment. Contemporary magnetic resonance imaging (MRI) techniques provide information on the location of disease but the need for contrast agents constrains their repeated application. We examined the correlation between functional MRI, performed without administration of contrast agent, and lung clearance index (LCI) from nitrogen multiple-breath washout (N2-MBW).40 children with CF (median (range) age 12.0 (6–18) years) and 12 healthy age-matched controls underwent functional and structural MRI and lung function tests on the same day. Functional MRI provided semiquantitative measures of perfusion (RQ) and ventilation (RFV) impairment as percentages of affected lung volume. Morphological MRI was evaluated using CF-specific scores. LCI measured global ventilation inhomogeneity.MRI detected functional impairment in CF:RFV19–38% andRQ16–35%.RFVandRQcorrelated strongly with LCI (r=0.76, p<0.0001 and r=0.85, p<0.0001, respectively), as did total morphology score (r=0.81, p<0.0001). All indices differed significantly between patients with CF and healthy controls (p<0.001).Noninvasive functional MRI is a promising method to detect and visualise perfusion and ventilation impairment in CF without the need for contrast agents.

8 September 2018 in Journal of Medical Imaging
Verified
Journal Article
Closed access
PDF file
EHEric Heim
Eric Heim
TRTobias Roß
Tobias Roß
ASAlexander Seitel
Alexander Seitel
KMKeno März
Keno März
BSBram Stieltjes
Bram Stieltjes
LMLena Maier-Hein
Lena Maier-Hein
Accurate segmentations in medical images are the foundations for various clinical applications. Advances in machine learning-based techniques show great potential for automatic image segmentation, but these techniques usually require a huge amount of accurately annotated reference segmentations for training. The guiding hypothesis of this paper was that crowd-algorithm collaboration could evolve as a key technique in large-scale medical data annotation. As an initial step toward this goal, we evaluated the performance of untrained individuals to detect and correct errors made by three-dimensional (3-D) medical segmentation algorithms. To this end, we developed a multistage segmentation pipeline incorporating a hybrid crowd-algorithm 3-D segmentation algorithm integrated into a medical imaging platform. In a pilot study of liver segmentation using a publicly available dataset of computed tomography scans, we show that the crowd is able to detect and refine inaccurate organ contours with a quality similar to that of experts (engineers with domain knowledge, medical students, and radiologists). Although the crowds need significantly more time for the annotation of a slice, the annotation rate is extremely high. This could render crowdsourcing a key tool for cost-effective large-scale medical image annotation.

1 August 2021 in European Journal of Radiology
Verified
Journal Article
Open access
LSLena Schmuelling
Lena Schmuelling
FFFabian C. Franzeck
Fabian C. Franzeck
CNChristian Hans Nickel
Christian Hans Nickel
GMGregory Mansella
Gregory Mansella
RBRoland Bingisser
Roland Bingisser
GSGregor Sommer
Gregor Sommer
Rapid communication of CT exams positive for pulmonary embolism (PE) is crucial for timely initiation of anticoagulation and patient outcome. It is unknown if deep learning automated detection of PE on CT Pulmonary Angiograms (CTPA) in combination with worklist prioritization and an electronic notification system (ENS) can improve communication times and patient turnaround in the Emergency Department (ED). In 01/2019, an ENS allowing direct communication between radiology and ED was installed. Starting in 10/2019, CTPAs were processed by a deep learning (DL)-powered algorithm for detection of PE. CTPAs acquired between 04/2018 and 06/2020 (n = 1808) were analysed. To assess the impact of the ENS and the DL-algorithm, radiology report reading times (RRT), radiology report communication time (RCT), time to anticoagulation (TTA), and patient turnaround times (TAT) in the ED were compared for three consecutive time periods. Performance measures of the algorithm were calculated on a per exam level (sensitivity, specificity, PPV, NPV, F1-score), with written reports and exam review as ground truth. Sensitivity of the algorithm was 79.6 % (95 %CI:70.8-87.2%), specificity 95.0 % (95 %CI:92.0-97.1%), PPV 82.2 % (95 %CI:73.9-88.3), and NPV 94.1 % (95 %CI:91.4-96 %). There was no statistically significant reduction of any of the observed times (RRT, RCT, TTA, TAT). DL-assisted detection of PE in CTPAs and ENS-assisted communication of results to referring physicians technically work. However, the mere clinical introduction of these tools, even if they exhibit a good performance, is not sufficient to achieve significant effects on clinical performance measures.