The pretreatment using 0.1 M NaOH is widely used on fish scales in the collagen production stage. This process is necessary to remove non-collagen proteins, fats, and other impurities, but improper pretreatment can reduce colla- gen levels obtained because prolonged exposure will damage connective tissue on scales, resulting in decreased yield. This research aims to determine the opti- mum NaOH pretreatment time for the collagen yield produced and identify changes in milkfish scales chemical composition and surface morphology. The stages in this study are: 1) preparation of milkfish scales; 2) pretreatment of milk- fish scales with NaOH 0.1 M at various time variations of 0, 1, 3, 6, and 8 h; and 3) determination of the effect of pretreatment time on collagen yield pro- duced from milkfish scales using proteases from Bacillus megaterium TR-10. The determination of optimum conditions is based on the content of water, ash, fat, protein, metal ion content (Hg2+, Pb2+, K+), and surface morphology of milk- fish scales before and after NaOH pretreatment is carried out. The results showed that the highest yield of 56.77 ppm was achieved at the pretreatment treatment of NaOH for 6 h. The longer the NaOH pretreatment time, the water, ash, fat, protein, and metal content in the scales decreases, and the surface morphology of milkfish scales is cleaner, but in the 8-h treatment, damage to connective tis- sue fibers in fish scales is observed. The optimal NaOH pre-treatment time for collagen production from milkfish scales is 6 h of treatment.