Spatially continuous estimates of forest aboveground biomass (AGB) are essential to supporting the sustainable management of forest ecosystems and providing invaluable information for quantifying and monitoring terrestrial carbon stocks. The launch of the Ice, Cloud, and land Elevation Satellite-2 (ICESat-2) on September 15th, 2018 offers an unparalleled opportunity to assess AGB at large scales using along-track samples that will be provided during its three-year mission. The main goal of this study was to investigate deep learning (DL) neural networks for mapping AGB with ICESat-2, using simulated photon-counting lidar (PCL)-estimated AGB for daytime, nighttime, and no noise scenarios, Landsat imagery, canopy cover, and land cover maps. The study was carried out in Sam Houston National Forest located in south-east Texas, using a simulated PCL-estimated AGB along two years of planned ICESat-2 profiles. The primary tasks were to investigate and determine neural network architecture, examine the hyper-parameter settings, and subsequently generate wall-to-wall AGB maps. A first set of models were developed using vegetation indices calculated from single-date Landsat imagery, canopy cover, and land cover, and a second set of models were generated using metrics from one year of Landsat imagery with canopy cover and land cover maps. To compare the effectiveness of final models, comparisons with Random Forests (RF) models were made. The deep neural network (DNN) models achieved R² values of 0.42, 0.49, and 0.50 for the daytime, nighttime, and no noise scenarios respectively. With the extended dataset containing metrics calculated from Landsat images acquired on different dates, substantial improvements in model performance for all data scenarios were noted. The R² values increased to 0.64, 0.66, and 0.67 for the daytime, nighttime, and no noise scenarios. Comparisons with Random forest (RF) prediction models highlighted similar results, with the same R² and root mean square error (RMSE) range (15–16 Mg/ha) for daytime and nighttime scenarios. Findings suggest that there is potential for mapping AGB using a combinatory approach with ICESat-2 and Landsat-derived products with DL.

National Aeronautics and Space Administration’s (NASA’s) Ice, Cloud, and land Elevation Satellite-2 (ICESat-2) provides rich insights over the Earth’s surface through elevation data collected by its Advanced Topographic Laser Altimeter System (ATLAS) since its launch in September 2018. While this mission is primarily aimed at capturing ice measurements, ICESat-2 also provides data over vegetated areas, offering the capability to gain insights into ecosystem structure and the potential to contribute to the sustainable management of forests. This study involved an examination of the utility of ICESat-2 for estimating forest aboveground biomass (AGB). The objectives of this study were to: (1) investigate the use of canopy metrics for estimating AGB, using data extracted from an ICESat-2 transect over forests in south-east Texas; (2) compare the accuracy for estimating AGB using data from the strong beam and weak beam; and (3) upscale predicted AGB estimates using variables from Landsat multispectral imagery and land cover and canopy cover maps, to generate a 30 m spatial resolution AGB map. Methods previously developed with simulated ICESat-2 data over Sam Houston National Forest (SHNF) in southeast Texas were adapted using actual data from an adjacent ICESat-2 transect over similar vegetation conditions. Custom noise filtering and photon classification algorithms were applied to ICESat-2’s geolocated photon data (ATL03) for one beam pair, consisting of a strong and weak beam, and canopy height estimates were retrieved. Canopy height parameters were extracted from 100 m segments in the along-track direction for estimating AGB, using regression analysis. ICESat-2-derived AGB estimates were then extrapolated to develop a 30 m AGB map for the study area, using vegetation indices from Landsat 8 Operational Land Imager (OLI), National Land Cover Database (NLCD) landcover and canopy cover, with random forests (RF). The AGB estimation models used few canopy parameters and suggest the possibility for applying well-developed methods for modeling AGB with airborne light detection and ranging (lidar) data, using processed ICESat-2 data. The final regression model achieved a R² and root mean square error (RMSE) value of 0.62 and 24.63 Mg/ha for estimating AGB and RF model evaluation with a separate test set yielded a R² of 0.58 and RMSE of 23.89 Mg/ha. Findings provide an initial look at the ability of ICESat-2 to estimate AGB and serve as a basis for further upscaling efforts.

Continuing population growth will result in increasing global demand for food and fiber for the foreseeable future. During the growing season, variability in the height of crops provides important information on plant health, growth, and response to environmental effects. This paper indicates the feasibility of using structure from motion (SfM) on images collected from 120 m above ground level (AGL) with a fixed-wing unmanned aerial vehicle (UAV) to estimate sorghum plant height with reasonable accuracy on a relatively large farm field. Correlations between UAV-based estimates and ground truth were strong on all dates (R² > 0.80) but are clearly better on some dates than others. Furthermore, a new method for improving UAV-based plant height estimates with multi-level ground control points (GCPs) was found to lower the root mean square error (RMSE) by about 20%. These results indicate that GCP-based height calibration has a potential for future application where accuracy is particularly important. Lastly, the image blur appeared to have a significant impact on the accuracy of plant height estimation. A strong correlation (R² = 0.85) was observed between image quality and plant height RMSE and the influence of wind was a challenge in obtaining high-quality plant height data. A strong relationship (R² = 0.99) existed between wind speed and image blurriness.

Small unmanned aerial systems (UAS) have emerged as high-throughput platforms for the collection of high-resolution image data over large crop fields to support precision agriculture and plant breeding research. At the same time, the improved efficiency in image capture is leading to massive datasets, which pose analysis challenges in providing needed phenotypic data. To complement these high-throughput platforms, there is an increasing need in crop improvement to develop robust image analysis methods to analyze large amount of image data. Analysis approaches based on deep learning models are currently the most promising and show unparalleled performance in analyzing large image datasets. This study developed and applied an image analysis approach based on a SegNet deep learning semantic segmentation model to estimate sorghum panicles counts, which are critical phenotypic data in sorghum crop improvement, from UAS images over selected sorghum experimental plots. The SegNet model was trained to semantically segment UAS images into sorghum panicles, foliage and the exposed ground using 462, 250 × 250 labeled images, which was then applied to field orthomosaic to generate a field-level semantic segmentation. Individual panicle locations were obtained after post-processing the segmentation output to remove small objects and split merged panicles. A comparison between model panicle count estimates and manually digitized panicle locations in 60 randomly selected plots showed an overall detection accuracy of 94%. A per-plot panicle count comparison also showed high agreement between estimated and reference panicle counts (Spearman correlation ρ = 0.88, mean bias = 0.65). Misclassifications of panicles during the semantic segmentation step and mosaicking errors in the field orthomosaic contributed mainly to panicle detection errors. Overall, the approach based on deep learning semantic segmentation showed good promise and with a larger labeled dataset and extensive hyper-parameter tuning, should provide even more robust and effective characterization of sorghum panicle counts.