James Joseph

James Joseph

orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 June 2014 in Advanced Materials
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Journal Article
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SMSwarup Kumar Maji
Swarup Kumar Maji
SSSivaramapanicker Sreejith
Sivaramapanicker Sreejith
JJJames Joseph
James Joseph
MLManjing Lin
Manjing Lin
Tingchao HeTingchao He
Tingchao He
YZYanli Zhao
Yanli Zhao

29 May 2015 in ACS Nano
Verified
Journal Article
Closed access
SSSivaramapanicker Sreejith
Sivaramapanicker Sreejith
JJJames Joseph
James Joseph
MLManjing Lin
Manjing Lin
NMNishanth Venugopal Menon
Nishanth Venugopal Menon
PBParijat Borah
Parijat Borah
YZYanli Zhao
Yanli Zhao

23 April 2019 in Nature Communications
Verified
Journal Article
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JYJonghee Yoon
Jonghee Yoon
JJJames Joseph
James Joseph
DWDale J. Waterhouse
Dale J. Waterhouse
ALA. Siri Luthman
A. Siri Luthman
GGGeorge S. D. Gordon
George S. D. Gordon
SBSarah Elizabeth Bohndiek
Sarah Elizabeth Bohndiek
Hyperspectral imaging (HSI) enables visualisation of morphological and biochemical information, which could improve disease diagnostic accuracy. Unfortunately, the wide range of image distortions that arise during flexible endoscopy in the clinic have made integration of HSI challenging. To address this challenge, we demonstrate a hyperspectral endoscope (HySE) that simultaneously records intrinsically co-registered hyperspectral and standard-of-care white light images, which allows image distortions to be compensated computationally and an accurate hyperspectral data cube to be reconstructed as the endoscope moves in the lumen. Evaluation of HySE performance shows excellent spatial, spectral and temporal resolution and high colour fidelity. Application of HySE enables: quantification of blood oxygenation levels in tissue mimicking phantoms; differentiation of spectral profiles from normal and pathological ex vivo human tissues; and recording of hyperspectral data under freehand motion within an intact ex vivo pig oesophagus model. HySE therefore shows potential for enabling HSI in clinical endoscopy.

8 September 2016 in IEEE Transactions on Medical Imaging
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Journal Article
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FBFrederic M. Brochu
Frederic M. Brochu
JBJoanna Brunker
Joanna Brunker
JJJames Joseph
James Joseph
MTMichal R Tomaszewski
Michal R Tomaszewski
SMStefan Morscher
Stefan Morscher
SBSarah Elizabeth Bohndiek
Sarah Elizabeth Bohndiek
Optoacoustic tomography is a fast developing imaging modality, combining the high contrast available from optical excitation of tissue with the high resolution and penetration depth of ultrasound detection. Light is subject to both absorption and scattering when traveling through tissue; adequate knowledge of tissue optical properties and hence the spatial fluence distribution is required to create an optoacoustic image that is directly proportional to chromophore concentrations at all depths. Using data from a commercial multispectral optoacoustic tomography (MSOT) system, we implemented an iterative optimization for fluence correction based on a finite-element implementation of the delta-Eddington approximation to the Radiative Transfer Equation (RTE). We demonstrate a linear relationship between the image intensity and absorption coefficients across multiple wavelengths and depths in phantoms. We also demonstrate improved feature visibility and spectral recovery at depth in phantoms and with in vivo measurements, suggesting our approach could in the future enable quantitative extraction of tissue absorption coefficients in biological tissue.

26 January 2017 in Journal of Nuclear Medicine
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JJJames Joseph
James Joseph
MTMichal R Tomaszewski
Michal R Tomaszewski
Isabel Quiros-GonzalezIsabel Quiros-Gonzalez
Isabel Quiros-Gonzalez
JWJudith Weber
Judith Weber
JBJoanna Brunker
Joanna Brunker
SBSarah Elizabeth Bohndiek
Sarah Elizabeth Bohndiek
Optoacoustic tomography (OT) is now widely used in preclinical imaging; however, the precision (repeatability and reproducibility) of OT has yet to be determined. Methods: We used a commercial small-animal OT system. Measurements in stable phantoms were used to independently assess the impact of system variables on precision (using coefficient of variation, COV), including acquisition wavelength, rotational position, and frame averaging. Variables due to animal handling and physiology, such as anatomic placement and anesthesia conditions, were then assessed in healthy nude mice using the left kidney and spleen as reference organs. Temporal variation was assessed by repeated measurements over hours and days both in phantoms and in vivo. Sensitivity to small-molecule dyes was determined in phantoms and in vivo; precision was assessed in vivo using IRDye800CW. Results: OT COV in a stable phantom was less than 2.8% across all wavelengths over 30 d. The factors with the greatest impact on signal repeatability in phantoms were rotational position and user experience, both of which still resulted in a COV of less than 4% at 700 nm. Anatomic region-of-interest size showed the highest variation, at 12% and 18% COV in the kidney and spleen, respectively; however, functional SO2 measurements based on a standard operating procedure showed an exceptional reproducibility of less than 4% COV. COV for repeated injections of IRDye800CW was 6.6%. Sources of variability for in vivo data included respiration rate, degree of user experience, and animal placement. Conclusion: Data acquired with our small-animal OT system were highly repeatable and reproducible across subjects and over time. Therefore, longitudinal OT studies may be performed with high confidence when our standard operating procedure is followed.

15 October 2018 in Cancer Research
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MTMichal R Tomaszewski
Michal R Tomaszewski
MGMarcel Gehrung
Marcel Gehrung
JJJames Joseph
James Joseph
Isabel Quiros-GonzalezIsabel Quiros-Gonzalez
Isabel Quiros-Gonzalez
JDJonathan A. Disselhorst
Jonathan A. Disselhorst
SBSarah Elizabeth Bohndiek
Sarah Elizabeth Bohndiek
Measuring the functional status of tumor vasculature, including blood flow fluctuations and changes in oxygenation, is important in cancer staging and therapy monitoring. Current clinically approved imaging modalities suffer long procedure times and limited spatiotemporal resolution. Optoacoustic tomography (OT) is an emerging clinical imaging modality that may overcome these challenges. By acquiring data at multiple wavelengths, OT can interrogate hemoglobin concentration and oxygenation directly and resolve contributions from injected contrast agents. In this study, we tested whether two dynamic OT techniques, oxygen-enhanced (OE) and dynamic contrast-enhanced (DCE)-OT, could provide surrogate biomarkers of tumor vascular function, hypoxia, and necrosis. We found that vascular maturity led to changes in vascular function that affected tumor perfusion, modulating the DCE-OT signal. Perfusion in turn regulated oxygen availability, driving the OE-OT signal. In particular, we demonstrate for the first time a strong per-tumor and spatial correlation between imaging biomarkers derived from these in vivo techniques and tumor hypoxia quantified ex vivo. Our findings indicate that OT may offer a significant advantage for localized imaging of tumor response to vascular-targeted therapies when compared with existing clinical DCE methods. Significance: Imaging biomarkers derived from optoacoustic tomography can be used as surrogate measures of tumor perfusion and hypoxia, potentially yielding rapid, multiparametric, and noninvasive cancer staging and therapeutic response monitoring in the clinic. Graphical http://cancerres.aacrjournals.org/content/canres/78/20/5980/F1.large.jpg. Cancer Res; 78(20); 5980–91. ©2018 AACR.