Swapan Chakrabarty

Dr. Swapan Chakrabarty

CFRES, Michigan Technological University, Houghton, Michigan, USA
orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 July 2020 in Molecular Ecology Resources
Verified
Journal Article
Open access
PDF file
LZLei Zhang
Lei Zhang
BLBo Liu
Bo Liu
WZWeigang Zheng
Weigang Zheng
CLConghui Liu
Conghui Liu
DZDandan Zhang
Dandan Zhang
Yutao XiaoYutao Xiao
Yutao Xiao
The rapid wide‐scale spread of fall armyworm (Spodoptera frugiperda) has caused serious crop losses globally. However, differences in the genetic background of subpopulations and the mechanisms of rapid adaptation behind the invasion are still not well understood. Here we report the assembly of a 390.38‐Mb chromosome‐level genome of fall armyworm derived from south‐central Africa using Pacific Bioscience (PacBio) and Hi‐C sequencing technologies, with scaffold N50 of 12.9 Mb and containing 22,260 annotated protein‐coding genes. Genome‐wide resequencing of 103 samples and strain identification were conducted to reveal the genetic background of fall armyworm populations in China. Analysis of genes related to pesticide‐ and Bacillus thuringiensis (Bt) resistance showed that the risk of fall armyworm developing resistance to conventional pesticides is very high. Laboratory bioassay results showed that insects invading China carry resistance to organophosphate and pyrethroid pesticides, but are sensitive to genetically modified maize expressing the Bt toxin Cry1Ab in field experiments. Additionally, two mitochondrial fragments were found to be inserted into the nuclear genome, with the insertion event occurring after the differentiation of the two strains. This study represents a valuable advance toward improving management strategies for fall armyworm.

25 July 2023 in Journal of Xenobiotics
Verified
Journal Article
Open access
PDF file
PCPanchali Chakraborty
Panchali Chakraborty
Ashok BiswasAshok Biswas
Ashok Biswas
Susmita DeySusmita Dey
Susmita Dey
TBTuli Bhattacharjee
Tuli Bhattacharjee
Swapan ChakrabartySwapan Chakrabarty
Swapan Chakrabarty
Cytochrome P450s (CYPs) are the most prominent family of enzymes involved in NADPH- and O2-dependent hydroxylation processes throughout all spheres of life. CYPs are crucial for the detoxification of xenobiotics in plants, insects, and other organisms. In addition to performing this function, CYPs serve as flexible catalysts and are essential for producing secondary metabolites, antioxidants, and phytohormones in higher plants. Numerous biotic and abiotic stresses frequently affect the growth and development of plants. They cause a dramatic decrease in crop yield and a deterioration in crop quality. Plants protect themselves against these stresses through different mechanisms, which are accomplished by the active participation of CYPs in several biosynthetic and detoxifying pathways. There are immense potentialities for using CYPs as a candidate for developing agricultural crop species resistant to biotic and abiotic stressors. This review provides an overview of the plant CYP families and their functions to plant secondary metabolite production and defense against different biotic and abiotic stresses.

Verified
Journal Article
Open access
PDF file
CWChao Wu
Chao Wu
Swapan ChakrabartySwapan Chakrabarty
Swapan Chakrabarty
JMJin Minghui
Jin Minghui
Kaiyu LiuKaiyu Liu
Kaiyu Liu
Yutao XiaoYutao Xiao
Yutao Xiao
ATP-binding cassette (ABC) transporters, a large class of transmembrane proteins, are widely found in organisms and play an important role in the transport of xenobiotics. Insect ABC transporters are involved in insecticide detoxification and Bacillus thuringiensis (Bt) toxin perforation. The complete ABC transporter is composed of two hydrophobic transmembrane domains (TMDs) and two nucleotide binding domains (NBDs). Conformational changes that are needed for their action are mediated by ATP hydrolysis. According to the similarity among their sequences and organization of conserved ATP-binding cassette domains, insect ABC transporters have been divided into eight subfamilies (ABCA–ABCH). This review describes the functions and mechanisms of ABC transporters in insecticide detoxification, plant toxic secondary metabolites transport and insecticidal activity of Bt toxin. With improved understanding of the role and mechanisms of ABC transporter in resistance to insecticides and Bt toxins, we can identify valuable target sites for developing new strategies to control pests and manage resistance and achieve green pest control.

1 February 2019 in Pesticide Biochemistry and Physiology
Verified
Journal Article
Closed access
MJMinghui Jin
Minghui Jin
CLChongyu Liao
Chongyu Liao
Swapan ChakrabartySwapan Chakrabarty
Swapan Chakrabarty
WZWeigang Zheng
Weigang Zheng
KWKongming Wu
Kongming Wu
Yutao XiaoYutao Xiao
Yutao Xiao

4 November 2020 in Pest Management Science
Verified
Journal Article
Closed access
PDF file
MJMinghui Jin
Minghui Jin
YYYanchao Yang
Yanchao Yang
YSYinxue Shan
Yinxue Shan
Swapan ChakrabartySwapan Chakrabarty
Swapan Chakrabarty
YCYing Cheng
Ying Cheng
Yutao XiaoYutao Xiao
Yutao Xiao

27 February 2020 in Pest Management Science
Verified
Journal Article
Closed access
PDF file
Swapan ChakrabartySwapan Chakrabarty
Swapan Chakrabarty
MJMinghui Jin
Minghui Jin
CWChao Wu
Chao Wu
PCPanchali Chakraborty
Panchali Chakraborty
Yutao XiaoYutao Xiao
Yutao Xiao