Juan Cruz

Prof. Juan Cruz

Department of Biomedical Engineering, Universidad de Los Andes, Bogotá 111711, Colombia
orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 July 2020 in PLOS ONE
Verified
Journal Article
Open access
PDF file
ASAlejandra Suarez-Arnedo
Alejandra Suarez-Arnedo
FFFelipe Torres Figueroa
Felipe Torres Figueroa
CCCamila Clavijo
Camila Clavijo
PAPablo Arbeláez
Pablo Arbeláez
Juan CruzJuan Cruz
Juan Cruz
CMCarolina Munoz
Carolina Munoz
In vitro scratch wound healing assay, a simple and low-cost technique that works along with other image analysis tools, is one of the most widely used 2D methods to determine the cellular migration and proliferation in processes such as regeneration and disease. There are open-source programs such as imageJ to analyze images of in vitro scratch wound healing assays, but these tools require manual tuning of various parameters, which is time-consuming and limits image throughput. For that reason, we developed an optimized plugin for imageJ to automatically recognize the wound healing size, correct the average wound width by considering its inclination, and quantify other important parameters such as: area, wound area fraction, average wound width, and width deviation of the wound images obtained from a scratch/ wound healing assay. Our plugin is easy to install and can be used with different operating systems. It can be adapted to analyze both individual images and stacks. Additionally, it allows the analysis of images obtained from bright field, phase contrast, and fluorescence microscopes. In conclusion, this new imageJ plugin is a robust tool to automatically standardize and facilitate quantification of different in vitro wound parameters with high accuracy compared with other tools and manual identification.

20 April 2020 in bioRxiv
Verified
Preprint
Open access
PDF file
ASAlejandra Suarez-Arnedo
Alejandra Suarez-Arnedo
FFFelipe Torres Figueroa
Felipe Torres Figueroa
CCCamila Clavijo
Camila Clavijo
PAPablo Arbeláez
Pablo Arbeláez
Juan CruzJuan Cruz
Juan Cruz
CMCarolina Munoz
Carolina Munoz
In vitro scratch wound healing assay, a simple and low-cost technique that works along with other image analysis tools, is one of the most widely used 2D methods to determine the cellular migration and proliferation in processes such as regeneration and disease. There are open-source programs such as imageJ to analyze images of in vitro scratch wound healing assays, but these tools require manual tuning of various parameters, which is time-consuming and limits image throughput. For that reason, we developed an optimized plugin for imageJ to automatically recognize the wound healing size, correct the average wound width by considering its inclination, and quantify other important parameters such as: area, wound area fraction, average wound width, and width deviation of the wound images obtained from a scratch/ wound healing assay. Our plugin is easy to install and can be used with different operating systems. It can be adapted to analyze both individual images and stacks. Additionally, it allows the analysis of images obtained from bright field, phase contrast, and fluorescence microscopes. In conclusion, this new imageJ plugin is a robust tool to automatically standardize and facilitate quantification of different in vitro wound parameters with high accuracy compared with other tools and manual identification.

22 March 2021 in Pharmaceutics
Verified
Journal Article
Open access
PDF file
Julian Torres-VanegasJulian Torres-Vanegas
Julian Torres-Vanegas
Juan CruzJuan Cruz
Juan Cruz
Luis H. ReyesLuis H. Reyes
Luis H. Reyes
Gene therapy has been used as a potential approach to address the diagnosis and treatment of genetic diseases and inherited disorders. In this line, non-viral systems have been exploited as promising alternatives for delivering therapeutic transgenes and proteins. In this review, we explored how biological barriers are effectively overcome by non-viral systems, usually nanoparticles, to reach an efficient delivery of cargoes. Furthermore, this review contributes to the understanding of several mechanisms of cellular internalization taken by nanoparticles. Because a critical factor for nanoparticles to do this relies on the ability to escape endosomes, researchers have dedicated much effort to address this issue using different nanocarriers. Here, we present an overview of the diversity of nanovehicles explored to reach an efficient and effective delivery of both nucleic acids and proteins. Finally, we introduced recent advances in the development of successful strategies to deliver cargoes.

15 March 2019 in Biosensors
Verified
Journal Article
Open access
PDF file
ACAna Lucía Campaña
Ana Lucía Campaña
SGSergio Florez Gonzalez
Sergio Florez Gonzalez
MNMabel Juliana Noguera
Mabel Juliana Noguera
OFOlga Fuentes
Olga Fuentes
Paola Ruiz PuentesPaola Ruiz Puentes
Paola Ruiz Puentes
Johann F. OsmaJohann F. Osma
Johann F. Osma
Emerging water pollutants such as pharmaceutical contaminants are suspected to induce adverse effects to human health. These molecules became worrisome due to their increasingly high concentrations in surface waters. Despite this alarming situation, available data about actual concentrations in the environment is rather scarce, as it is not commonly monitored or regulated. This is aggravated even further by the absence of portable and reliable methods for their determination in the field. A promising way to tackle these issues is the use of enzyme-based and miniaturized biosensors for their electrochemical detection. Here, we present an overview of the latest developments in amperometric microfluidic biosensors that include, modeling and multiphysics simulation, design, manufacture, testing, and operation methods. Different types of biosensors are described, highlighting those based on oxidases/peroxidases and the integration with microfluidic platforms. Finally, issues regarding the stability of the biosensors and the enzyme molecules are discussed, as well as the most relevant approaches to address these obstacles.

11 September 2020 in Nanomaterials
Verified
Journal Article
Open access
PDF file
Laura Rueda-GensiniLaura Rueda-Gensini
Laura Rueda-Gensini
Javier CifuentesJavier Cifuentes
Javier Cifuentes
MCMaria Claudia Castellanos
Maria Claudia Castellanos
Paola Ruiz PuentesPaola Ruiz Puentes
Paola Ruiz Puentes
JSJulian Serna
Julian Serna
Juan CruzJuan Cruz
Juan Cruz
Iron oxide nanoparticles (IONs) have been widely explored for biomedical applications due to their high biocompatibility, surface-coating versatility, and superparamagnetic properties. Upon exposure to an external magnetic field, IONs can be precisely directed to a region of interest and serve as exceptional delivery vehicles and cellular markers. However, the design of nanocarriers that achieve an efficient endocytic uptake, escape lysosomal degradation, and perform precise intracellular functions is still a challenge for their application in translational medicine. This review highlights several aspects that mediate the activation of the endosomal pathways, as well as the different properties that govern endosomal escape and nuclear transfection of magnetic IONs. In particular, we review a variety of ION surface modification alternatives that have emerged for facilitating their endocytic uptake and their timely escape from endosomes, with special emphasis on how these can be manipulated for the rational design of cell-penetrating vehicles. Moreover, additional modifications for enhancing nuclear transfection are also included in the design of therapeutic vehicles that must overcome this barrier. Understanding these mechanisms opens new perspectives in the strategic development of vehicles for cell tracking, cell imaging and the targeted intracellular delivery of drugs and gene therapy sequences and vectors.

24 April 2024 in Sustainability
Verified
Journal Article
Open access
PDF file
JBJulián Fernando Becerra-Encinales
Julián Fernando Becerra-Encinales
PHPaloma Bernal Hernandez
Paloma Bernal Hernandez
JBJorge A. Beltrán-Giraldo
Jorge A. Beltrán-Giraldo
ACAlexandre Patrick Cooman
Alexandre Patrick Cooman
Luis H. ReyesLuis H. Reyes
Luis H. Reyes
Juan CruzJuan Cruz
Juan Cruz
This scoping review employed the PRISMA-ScR framework to dissect the complexities of technological extension in agriculture within developing nations, where varying socio-economic, cultural, and environmental facets deeply influence extension strategies. Our study aimed to identify and expand upon the existing knowledge of critical factors—both challenges and opportunities—that affect the efficacy of agricultural extension, with a focus on contextual variations. To achieve this, we conducted a comprehensive review of the relevant academic contributions from 2013 onwards. This included articles, reviews, conference proceedings, book chapters, and data papers. Our analysis focused on scrutinizing the interaction dynamics between extension personnel and farmers, the adaptation of technologies to local contexts, and the significance of cross-sector collaboration. Through bibliometric analysis, we provide a synthesis of 32 pertinent records. Our findings advocate for a paradigm shift from the traditional linear knowledge transfer to a more encompassing approach that values bidirectional communication, cultural awareness, and the active involvement of local farming communities. We argue for extension practices that are attuned to environmental dynamics, promote long-term economic sustainability, and are informed by theoretical perspectives that can refine the design of extension systems and models. Our review posits that the enhancement of sustainable agricultural technology adoption lies in a profound reform of extension systems. Such reform should focus on design and operational models that are more inclusive, adaptive, and acutely attuned to the complex realities of farmers in emerging economies. This integrative, systemic, and holistic approach proposes a framework to bolster agricultural sustainability and rural development.