Rodrigo Agerri

Dr. Rodrigo Agerri

IXA NLP Group, University of the Basque Country UPV/EHU, 20018 Donostia-San Sebastián, Spain
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Research Focus & Metrics

Academic Career Length

25Years (2002-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 July 2024 in Artificial Intelligence in Medicine
Verified
Journal Article
Open access
IAIñigo Alonso
Iñigo Alonso
MOMaite Oronoz
Maite Oronoz
Rodrigo AgerriRodrigo Agerri
Rodrigo Agerri
Large Language Models (LLMs) have the potential of facilitating the development of Artificial Intelligence technology to assist medical experts for interactive decision support. This potential has been illustrated by the state-of-the-art performance obtained by LLMs in Medical Question Answering, with striking results such as passing marks in licensing medical exams. However, while impressive, the required quality bar for medical applications remains far from being achieved. Currently, LLMs remain challenged by outdated knowledge and by their tendency to generate hallucinated content. Furthermore, most benchmarks to assess medical knowledge lack reference gold explanations which means that it is not possible to evaluate the reasoning of LLMs predictions. Finally, the situation is particularly grim if we consider benchmarking LLMs for languages other than English which remains, as far as we know, a totally neglected topic. In order to address these shortcomings, in this paper we present MedExpQA, the first multilingual benchmark based on medical exams to evaluate LLMs in Medical Question Answering. To the best of our knowledge, MedExpQA includes for the first time reference gold explanations, written by medical doctors, of the correct and incorrect options in the exams. Comprehensive multilingual experimentation using both the gold reference explanations and Retrieval Augmented Generation (RAG) approaches show that performance of LLMs, with best results around 75 accuracy for English, still has large room for improvement, especially for languages other than English, for which accuracy drops 10 points. Therefore, despite using state-of-the-art RAG methods, our results also demonstrate the difficulty of obtaining and integrating readily available medical knowledge that may positively impact results on downstream evaluations for Medical Question Answering. Data, code, and fine-tuned models will be made publicly available.1.

1 September 2016 in Artificial Intelligence
Verified
Journal Article
Closed access
Rodrigo AgerriRodrigo Agerri
Rodrigo Agerri
GRGerman Rigau
German Rigau

1 October 2016 in Knowledge-Based Systems
Verified
Journal Article
Open access
PVP.T.J.M. Vossen
P.T.J.M. Vossen
Rodrigo AgerriRodrigo Agerri
Rodrigo Agerri
IAItziar Aldabe
Itziar Aldabe
ACAgata Cybulska
Agata Cybulska
MEMarieke van Erp
Marieke van Erp
RSRoxane Segers
Roxane Segers
In this article, we describe a system that reads news articles in four different languages and detects what happened, who is involved, where and when. This event-centric information is represented as episodic situational knowledge on individuals in an interoperable RDF format that allows for reasoning on the implications of the events. Our system covers the complete path from unstructured text to structured knowledge, for which we defined a formal model that links interpreted textual mentions of things to their representation as instances. The model forms the skeleton for interoperable interpretation across different sources and languages. The real content, however, is defined using multilingual and cross-lingual knowledge resources, both semantic and episodic. We explain how these knowledge resources are used for the processing of text and ultimately define the actual content of the episodic situational knowledge that is reported in the news. The knowledge and model in our system can be seen as an example how the Semantic Web helps NLP. However, our systems also generate massive episodic knowledge of the same type as the Semantic Web is built on. We thus envision a cycle of knowledge acquisition and NLP improvement on a massive scale. This article reports on the details of the system but also on the performance of various high-level components. We demonstrate that our system performs at state-of-the-art level for various subtasks in the four languages of the project, but that we also consider the full integration of these tasks in an overall system with the purpose of reading text. We applied our system to millions of news articles, generating billions of triples expressing formal semantic properties. This shows the capacity of the system to perform at an unprecedented scale

1 May 2015 in Knowledge-Based Systems
Verified
Journal Article
Closed access
Rodrigo AgerriRodrigo Agerri
Rodrigo Agerri
XAXabier Artola
Xabier Artola
ZBZuhaitz Beloki
Zuhaitz Beloki
GRGerman Rigau
German Rigau
ASAitor Soroa
Aitor Soroa

1 March 2024 in Computational Linguistics
Verified
Journal Article
Open access
PDF file
OTOlia Toporkov
Olia Toporkov
Rodrigo AgerriRodrigo Agerri
Rodrigo Agerri
Lemmatization is a natural language processing (NLP) task which consists of producing, from a given inflected word, its canonical form or lemma. Lemmatization is one of the basic tasks that facilitate downstream NLP applications, and is of particular importance for high-inflected languages. Given that the process to obtain a lemma from an inflected word can be explained by looking at its morphosyntactic category, including fine-grained morphosyntactic information to train contextual lemmatizers has become common practice, without considering whether that is the optimum in terms of downstream performance. In order to address this issue, in this paper we empirically investigate the role of morphological information to develop contextual lemmatizers in six languages within a varied spectrum of morphological complexity: Basque, Turkish, Russian, Czech, Spanish and English. Furthermore, and unlike the vast majority of previous work, we also evaluate lemmatizers in out-of-domain settings, which constitutes, after all, their most common application use. The results of our study are rather surprising. It turns out that providing lemmatizers with fine-grained morphological features during training is not that beneficial, not even for agglutinative languages. In fact, modern contextual word representations seem to implicitly encode enough morphological information to obtain competitive contextual lemmatizers without seeing any explicit morphological signal. Moreover, our experiments suggest that the best lemmatizers out-of-domain are those using simple UPOS tags or those trained without morphology and, finally, that current evaluation practices for lemmatization are not adequate to clearly discriminate between models.

23 February 2021 in Sustainability
Verified
Journal Article
Open access
PDF file
ASAinhoa Serna
Ainhoa Serna
ASAitor Soroa
Aitor Soroa
Rodrigo AgerriRodrigo Agerri
Rodrigo Agerri
Users voluntarily generate large amounts of textual content by expressing their opinions, in social media and specialized portals, on every possible issue, including transport and sustainability. In this work we have leveraged such User Generated Content to obtain a high accuracy sentiment analysis model which automatically analyses the negative and positive opinions expressed in the transport domain. In order to develop such model, we have semiautomatically generated an annotated corpus of opinions about transport, which has then been used to fine-tune a large pretrained language model based on recent deep learning techniques. Our empirical results demonstrate the robustness of our approach, which can be applied to automatically process massive amounts of opinions about transport. We believe that our method can help to complement data from official statistics and traditional surveys about transport sustainability. Finally, apart from the model and annotated dataset, we also provide a transport classification score with respect to the sustainability of the transport types found in the use case dataset.