Geert Stoopen

Mr. Geert Stoopen


Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 October 2015 in BMC Genomics
Verified
Journal Article
Open access
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AJAafke W.F. Janssen
Aafke W.F. Janssen
BBBark Betzel
Bark Betzel
GSGeert Stoopen
Geert Stoopen
FBFrits J. Berends
Frits J. Berends
IJIgnace M. Janssen
Ignace M. Janssen
SKSander Kersten
Sander Kersten
Studies in mice have shown that PPARα is an important regulator of lipid metabolism in liver and key transcription factor involved in the adaptive response to fasting. However, much less is known about the role of PPARα in human liver. Here we set out to study the function of PPARα in human liver via analysis of whole genome gene regulation in human liver slices treated with the PPARα agonist Wy14643. Quantitative PCR indicated that PPARα is well expressed in human liver and human liver slices and that the classical PPARα targets PLIN2, VLDLR, ANGPTL4, CPT1A and PDK4 are robustly induced by PPARα activation. Transcriptomics analysis indicated that 617 genes were upregulated and 665 genes were downregulated by PPARα activation (q value < 0.05). Many genes induced by PPARα activation were involved in lipid metabolism (ACSL5, AGPAT9, FADS1, SLC27A4), xenobiotic metabolism (POR, ABCC2, CYP3A5) or the unfolded protein response, whereas most of the downregulated genes were involved in immune-related pathways. Among the most highly repressed genes upon PPARα activation were several chemokines (e.g. CXCL9-11, CCL8, CX3CL1, CXCL6), interferon γ-induced genes (e.g. IFITM1, IFIT1, IFIT2, IFIT3) and numerous other immune-related genes (e.g. TLR3, NOS2, and LCN2). Comparative analysis of gene regulation by Wy14643 between human liver slices and primary human hepatocytes showed that down-regulation of gene expression by PPARα is much better captured by liver slices as compared to primary hepatocytes. In particular, PPARα activation markedly suppressed immunity/inflammation-related genes in human liver slices but not in primary hepatocytes. Finally, several putative new target genes of PPARα were identified that were commonly induced by PPARα activation in the two human liver model systems, including TSKU, RHOF, CA12 and VSIG10L. Our paper demonstrates the suitability and superiority of human liver slices over primary hepatocytes for studying the functional role of PPARα in human liver. Our data underscore the major role of PPARα in regulation of hepatic lipid and xenobiotic metabolism in human liver and reveal a marked immuno-suppressive/anti-inflammatory effect of PPARα in human liver slices that may be therapeutically relevant for non-alcoholic fatty liver disease.

12 September 2019 in Toxins
Verified
Journal Article
Open access
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NMNathan Meijer
Nathan Meijer
GSGeert Stoopen
Geert Stoopen
Ine Van Der Fels-KlerxIne Van Der Fels-Klerx
Ine Van Der Fels-Klerx
JLJoop Van Loon
Joop Van Loon
JCJohn Carney
John Carney
GBGuido Bosch
Guido Bosch
The larvae of the black soldier fly (Hermetia illucens L., BSFL) have received increased industrial interest as a novel protein source for food and feed. Previous research has found that insects, including BSFL, are capable of metabolically converting aflatoxin B1 (AFB1), but recovery of total AFB1 is less than 20% when accounting for its conversion to most known metabolites. The aim of this study was to examine the conversion of AFB1 by S9 extracts of BSFL reared on substrates with or without AFB1. Liver S9 of Aroclor-induced rats was used as a reference. To investigate whether cytochrome P450 enzymes are involved in the conversion of AFB1, the inhibitor piperonyl butoxide (PBO) was tested in a number of treatments. The results showed that approximately 60% of AFB1 was converted to aflatoxicol and aflatoxin P1. The remaining 40% of AFB1 was not converted. Cytochrome P450s were indeed responsible for metabolic conversion of AFB1 into AFP1, and a cytoplasmic reductase was most likely responsible for conversion of AFB1 into aflatoxicol.

10 October 2013 in BMC Medical Genomics
Verified
Journal Article
Open access
PDF file
ESEwa Szalowska
Ewa Szalowska
GSGeert Stoopen
Geert Stoopen
MGMaria Groot
Maria Groot
PHPeter Jm Hendriksen
Peter Jm Hendriksen
APAd Peijnenburg
Ad Peijnenburg
Unexpected cholestasis substantially contributes to drug failure in clinical trials. Current models used for safety assessment in drug development do not accurately predict cholestasis in humans. Therefore, it is of relevance to develop new screening models that allow identifying drugs with cholestatic properties.

1 August 2013 in Toxicology in Vitro
Verified
Journal Article
Closed access
ESEwa Szalowska
Ewa Szalowska
GSGeert Stoopen
Geert Stoopen
JRJeroen C.W. Rijk
Jeroen C.W. Rijk
SWSi Wang
Si Wang
PHPeter J.M. Hendriksen
Peter J.M. Hendriksen
APAd A.C.M. Peijnenburg
Ad A.C.M. Peijnenburg

1 June 2020 in Toxicology in Vitro
Verified
Journal Article
Closed access
MAMariana Reis Arantes
Mariana Reis Arantes
APAd Peijnenburg
Ad Peijnenburg
PHPeter J.M. Hendriksen
Peter J.M. Hendriksen
GSGeert Stoopen
Geert Stoopen
TAThiago Silva Almeida
Thiago Silva Almeida
JOJose Oliveira
Jose Oliveira