Michal Masarik

Prof. Dr. Michal Masarik


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
Verified
Journal Article
Open access
PDF file
BRBranislav Ruttkay-Nedecky
Branislav Ruttkay-Nedecky
LNLukas Nejdl
Lukas Nejdl
JGJaromir Gumulec
Jaromir Gumulec
Ondrej ZitkaOndrej Zitka
Ondrej Zitka
Michal MasarikMichal Masarik
Michal Masarik
Rene KizekRene Kizek
Rene Kizek
Free radicals are chemical particles containing one or more unpaired electrons, which may be part of the molecule. They cause the molecule to become highly reactive. The free radicals are also known to play a dual role in biological systems, as they can be either beneficial or harmful for living systems. It is clear that there are numerous mechanisms participating on the protection of a cell against free radicals. In this review, our attention is paid to metallothioneins (MTs) as small, cysteine-rich and heavy metal-binding proteins, which participate in an array of protective stress responses. The mechanism of the reaction of metallothioneins with oxidants and electrophilic compounds is discussed. Numerous reports indicate that MT protects cells from exposure to oxidants and electrophiles, which react readily with sulfhydryl groups. Moreover, MT plays a key role in regulation of zinc levels and distribution in the intracellular space. The connections between zinc, MT and cancer are highlighted.

21 September 2012 in Oncology Letters
Verified
Journal Article
Open access
PDF file
Ondrej ZitkaOndrej Zitka
Ondrej Zitka
SSSylvie Skalickova
Sylvie Skalickova
JGJaromir Gumulec
Jaromir Gumulec
Michal MasarikMichal Masarik
Michal Masarik
Vojtech AdamVojtech Adam
Vojtech Adam
Rene KizekRene Kizek
Rene Kizek
Oxidative stress causes profound alterations of various biological structures, including cellular membranes, lipids, proteins and nucleic acids, and it is involved in numerous malignancies. Reduced glutathione (GSH) is considered to be one of the most important scavengers of reactive oxygen species (ROS), and its ratio with oxidised glutathione (GSSG) may be used as a marker of oxidative stress. The main aim of this study was to determine GSH:GSSG ratio in the blood serum of paediatric cancer patients to use this ratio as a potential marker of oxidative stress. The whole procedure was optimised and the recoveries for both substances were greater than 80% under the optimised conditions. We analysed a group of paediatric patients (n=116) with various types of cancer, including neuroblastoma, anaplastic ependymoma, germ cell tumour, genital tract tumour, lymphadenopathy, rhabdomyosarcoma, nephroblastoma, Ewing's sarcoma, osteosarcoma, Hodgkin's lymphoma, medulloblastoma and retinoblastoma. We simultaneously determined the levels of reduced and oxidised glutathione, and thus, its ratio in the blood serum of the patients. The highest ratio was observed in retinoblastoma patients and the lowest in anaplastic ependymoma. We were able to distinguish between the diagnoses based on the results of the obtained GSH:GSSG ratio.

30 March 2019 in Molecular Cancer
Verified
Journal Article
Open access
PDF file
BPBarbora Peltanova
Barbora Peltanova
MRMartina Raudenska
Martina Raudenska
Michal MasarikMichal Masarik
Michal Masarik
The tumor microenvironment (TME) is comprised of many different cell populations, such as cancer-associated fibroblasts and various infiltrating immune cells, and non-cell components of extracellular matrix. These crucial parts of the surrounding stroma can function as both positive and negative regulators of all hallmarks of cancer development, including evasion of apoptosis, induction of angiogenesis, deregulation of the energy metabolism, resistance to the immune detection and destruction, and activation of invasion and metastasis. This review represents a summary of recent studies focusing on describing these effects of microenvironment on initiation and progression of the head and neck squamous cell carcinoma, focusing on oral squamous cell carcinoma, since it is becoming clear that an investigation of differences in stromal composition of the head and neck squamous cell carcinoma microenvironment and their impact on cancer development and progression may help better understand the mechanisms behind different responses to therapy and help define possible targets for clinical intervention.

1 January 2012 in Metallomics
Verified
Journal Article
Open access
PDF file
PBPetr Babula
Petr Babula
Michal MasarikMichal Masarik
Michal Masarik
Vojtech AdamVojtech Adam
Vojtech Adam
TETomas Eckschlager
Tomas Eckschlager
MSMarie Stiborova
Marie Stiborova
Rene KizekRene Kizek
Rene Kizek
Metallothioneins (MT) are a family of ubiquitous proteins, whose role is still discussed in numerous papers, but their affinity to some metal ions is

1 November 2010 in Current Medicinal Chemistry
Verified
Journal Article
Closed access
PDF file
Ondrej ZitkaOndrej Zitka
Ondrej Zitka
JKJ. Kukacka
J. Kukacka
SKS. Krizkov
S. Krizkov
Dalibor HúskaDalibor Húska
Dalibor Húska
Vojtech AdamVojtech Adam
Vojtech Adam
Rene KizekRene Kizek
Rene Kizek
Matrix metalloproteinases (MMPs), also known as matrixins, belong to a group of zinc-dependent proteins, which are thought to play a central role in the breakdown of extracellular matrix. Collagen, elastin, gelatin and casein are major components cleaved by MMPs. The breakdown of these components is essential for many physiological processes such as embryonic development, morphogenesis, reproduction, and tissue resorption and remodelling. MMPs also participate in pathological processes such as arthritis, cancer, cardiovascular and neurological diseases. This review summarizes current knowledge regarding these proteins, their participation in physiological and pathophysiological roles, their involvement in activation and inhibition, and their interactions with other metal-binding proteins including metallothioneins.

28 June 2019 in BMC Bioinformatics
Verified
Journal Article
Open access
PDF file
TVTomáš Vičar
Tomáš Vičar
JBJan Balvan
Jan Balvan
JJJosef Jaros
Josef Jaros
FJFlorian Jug
Florian Jug
RKRadim Kolář
Radim Kolář
JGJaromir Gumulec
Jaromir Gumulec
Because of its non-destructive nature, label-free imaging is an important strategy for studying biological processes. However, routine microscopic techniques like phase contrast or DIC suffer from shadow-cast artifacts making automatic segmentation challenging. The aim of this study was to compare the segmentation efficacy of published steps of segmentation work-flow (image reconstruction, foreground segmentation, cell detection (seed-point extraction) and cell (instance) segmentation) on a dataset of the same cells from multiple contrast microscopic modalities. We built a collection of routines aimed at image segmentation of viable adherent cells grown on the culture dish acquired by phase contrast, differential interference contrast, Hoffman modulation contrast and quantitative phase imaging, and we performed a comprehensive comparison of available segmentation methods applicable for label-free data. We demonstrated that it is crucial to perform the image reconstruction step, enabling the use of segmentation methods originally not applicable on label-free images. Further we compared foreground segmentation methods (thresholding, feature-extraction, level-set, graph-cut, learning-based), seed-point extraction methods (Laplacian of Gaussians, radial symmetry and distance transform, iterative radial voting, maximally stable extremal region and learning-based) and single cell segmentation methods. We validated suitable set of methods for each microscopy modality and published them online. We demonstrate that image reconstruction step allows the use of segmentation methods not originally intended for label-free imaging. In addition to the comprehensive comparison of methods, raw and reconstructed annotated data and Matlab codes are provided.