Jonathan Lamont Batchelor

Dr. Jonathan Lamont Batchelor

University of Washington, Seattle, Washington, USA
+2
orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 December 2022 in Remote Sensing
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Journal Article
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Jonathan Lamont BatchelorJonathan Lamont Batchelor
Jonathan Lamont Batchelor
TWTodd M. Wilson
Todd M. Wilson
Michael OlsenMichael Olsen
Michael Olsen
WRWilliam J. Ripple
William J. Ripple
We developed new measures of structural complexity using single point terrestrial laser scanning (TLS) point clouds. These metrics are depth, openness, and isovist. Depth is a three-dimensional, radial measure of the visible distance in all directions from plot center. Openness is the percent of scan pulses in the near-omnidirectional view without a return. Isovists are a measurement of the area visible from the scan location, a quantified measurement of the viewshed within the forest canopy. 243 scans were acquired in 27 forested stands in the Pacific Northwest region of the United States, in different ecoregions representing a broad gradient in structural complexity. All stands were designated natural areas with little to no human perturbations. We created “structural signatures” from depth and openness metrics that can be used to qualitatively visualize differences in forest structures and quantitively distinguish the structural composition of a forest at differing height strata. In most cases, the structural signatures of stands were effective at providing statistically significant metrics differentiating forests from various ecoregions and growth patterns. Isovists were less effective at differentiating between forested stands across multiple ecoregions, but they still quantify the ecological important metric of occlusion. These new metrics appear to capture the structural complexity of forests with a high level of precision and low observer bias and have great potential for quantifying structural change to forest ecosystems, quantifying effects of forest management activities, and describing habitat for organisms. Our measures of structure can be used to ground truth data obtained from aerial lidar to develop models estimating forest structure.

23 May 2019 in Forests
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Journal Article
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AKAkira Kato
Akira Kato
L. Monika MoskalL. Monika Moskal
L. Monika Moskal
Jonathan Lamont BatchelorJonathan Lamont Batchelor
Jonathan Lamont Batchelor
David ThauDavid Thau
David Thau
Andrew T. HudakAndrew T. Hudak
Andrew T. Hudak
Three-dimensional point data acquired by Terrestrial Lidar Scanning (TLS) is used as ground observation in comparisons with fire severity indices computed from Landsat satellite multi-temporal images through Google Earth Engine (GEE). Forest fires are measured by the extent and severity of fire. Current methods of assessing fire severity are limited to on-site visual inspection or the use of satellite and aerial images to quantify severity over larger areas. On the ground, assessment of fire severity is influenced by the observers’ knowledge of the local ecosystem and ability to accurately assess several forest structure measurements. The objective of this study is to introduce TLS to validate spectral burned ratios obtained from Landsat images. The spectral change was obtained by an image compositing technique through GEE. The 32 plots were collected using TLS in Wood Buffalo National Park, Canada. TLS-generated 3D points were converted to voxels and the counted voxels were compared in four height strata. There was a negative linear relationship between spectral indices and counted voxels in the height strata between 1 to 5 m to produce R2 value of 0.45 and 0.47 for unburned plots and a non-linear relationship in the height strata between 0 to 0.5m for burned plots to produce R2 value of 0.56 and 0.59. Shrub or stand development was related with the spectral indices at unburned plots, and vegetation recovery in the ground surface was related at burned plots. As TLS systems become more cost efficient and portable, techniques used in this study will be useful to produce objective assessments of structure measurements for fire refugia and ecological response after a fire. TLS is especially useful for the quick ground assessments which are needed for forest fire applications.

9 September 2023 in Remote Sensing
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Journal Article
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Jonathan Lamont BatchelorJonathan Lamont Batchelor
Jonathan Lamont Batchelor
Andrew T. HudakAndrew T. Hudak
Andrew T. Hudak
PGPeter Gould
Peter Gould
L. Monika MoskalL. Monika Moskal
L. Monika Moskal
The Canada lynx is listed as a threatened species, and as such, the identification and conservation of lynx habitats is of significant concern. Lynxes require areas with high amounts of horizontal cover made up of ground vegetation. Lidar offers a robust method of quantifying vegetation structure, and airborne lidar has been acquired across large areas of potential lynx habitat. Unfortunately, airborne lidar is often not able to directly measure understory horizontal cover due to occlusion from the upper branches. Terrestrial lidar does directly measure understory horizontal cover and can be used as training data for larger area models using airborne lidar. In this study, we acquired 168 individual terrestrial lidar scans (TLS) across 42 sites in north-central Washington state. We generated metrics from the single-scan TLS plots using depth maps, a digital cover board, and voxels. Using our TLS metrics as the training data for the airborne lidar acquired for the entire Loomis State Forest, we were able to produce a model using xgboost with 85% accuracy. We believe our study shows that single-scan TLS plots can be used effectively to quantify fine-scale forest structure elements relevant to species habitat, to then inform larger area models using airborne lidar.

16 August 2022 in Fire
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Journal Article
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MHMolly M. Herzog
Molly M. Herzog
Andrew T. HudakAndrew T. Hudak
Andrew T. Hudak
David WeiseDavid Weise
David Weise
ABAshley Bradley
Ashley Bradley
RTRussell G. Tonkyn
Russell G. Tonkyn
TJTimothy J. Johnson
Timothy J. Johnson
Forest fires spread via production and combustion of pyrolysis gases in the understory. The goal of the present paper is to understand the spatial location, distribution, and fraction (relative to the overstory) of understory plants, in this case, sparkleberry shrub, namely its degree of understory consumption upon burn, and to search for correlations between the degree of shrub consumption to the composition of emitted pyrolysis gases. Data were collected in situ at seven small experimental prescribed burns at Ft. Jackson, an army base in South Carolina, USA. Using airborne laser scanning (ALS) to map overstory tree crowns and terrestrial laser scanning (TLS) to characterize understory shrub fuel density, both pre- and postburn estimates of sparkleberry coverage were obtained. Sparkleberry clump polygons were manually digitized from a UAV-derived orthoimage of the understory and intersected with the TLS point cloud-derived rasters of pre- and postburn shrub fuel bulk density; these were compared in relation to overstory crown cover as well as to ground truth. Shrub fuel consumption was estimated from the digitized images; sparkleberry clump distributions were generally found to not correlate well to the overstory tree crowns, suggesting it is shade-tolerant. Moreover, no relationship was found between the magnitude of the fuel consumption and the chemical composition of pyrolysis gases, even though mixing ratios of 25 individual gases were measured.

7 March 2023 in Remote Sensing
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Jonathan Lamont BatchelorJonathan Lamont Batchelor
Jonathan Lamont Batchelor
EREric Rowell
Eric Rowell
SPSusan Prichard
Susan Prichard
DNDeborah Nemens
Deborah Nemens
JCJames Cronan
James Cronan
L. Monika MoskalL. Monika Moskal
L. Monika Moskal
Electromagnetic radiation at 1550 nm is highly absorbed by water and offers a novel way to collect fuel moisture data, along with 3D structures of wildland fuels/vegetation, using lidar. Two terrestrial laser scanning (TLS) units (FARO s350 (phase shift, PS) and RIEGL vz-2000 (time of flight, TOF)) were assessed in a series of laboratory experiments to determine if lidar can be used to estimate the moisture content of dead forest litter. Samples consisted of two control materials, the angle and position of which could be manipulated (pine boards and cheesecloth), and four single-species forest litter types (Douglas-fir needles, ponderosa pine needles, longleaf pine needles, and southern red oak leaves). Sixteen sample trays of each material were soaked overnight, then allowed to air dry with scanning taking place at 1 h, 2 h, 4 h, 8 h, 12 h, and then in 12 h increments until the samples reached equilibrium moisture content with the ambient relative humidity. The samples were then oven-dried for a final scanning and weighing. The spectral reflectance values of each material were also recorded over the same drying intervals using a field spectrometer. There was a strong correlation between the intensity and standard deviation of intensity per sample tray and the moisture content of the dead leaf litter. A multiple linear regression model with a break at 100% gravimetric moisture content produced the best model with R2 values as high as 0.97. This strong relationship was observed with both the TOF and PS lidar units. At fuel moisture contents greater than 100% gravimetric water content, the correlation between the pulse intensity values recorded by both scanners and the fuel moisture content was the strongest. The relationship deteriorated with distance, with the TOF scanner maintaining a stronger relationship at distance than the PS scanner. Our results demonstrate that lidar can be used to detect and quantify fuel moisture across a range of forest litter types. Based on our findings, lidar may be used to quantify fuel moisture levels in near real-time and could be used to create spatial maps of wildland fuel moisture content.

23 June 2025 in Fire Ecology
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Journal Article
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Jonathan Lamont BatchelorJonathan Lamont Batchelor
Jonathan Lamont Batchelor
Andrew T. HudakAndrew T. Hudak
Andrew T. Hudak
AKAkira Kato
Akira Kato
David WeiseDavid Weise
David Weise
L. Monika MoskalL. Monika Moskal
L. Monika Moskal
Background: Remote sensing techniques for assessing fire severity using two-dimensional imagery, such as satellite data, are limited to a single severity value per pixel, typically at a 30-m resolution. This often leads to an underestimation of understory fire severity, as live tree crowns can obscure the extent of the burned area beneath. By leveraging the three-dimensional capabilities of drone imagery, a more comprehensive assessment of fire severity across different canopy height strata can be achieved. Methods: We show how drone digital aerial photogrammetry (dDAP), also known as structure from motion, can be used to generate three-dimensional multispectral photogrammetric point clouds for quantifying fire effects at various canopy height strata as well as classify ground cover below normally occluding overstory trees. Conducted during prescribed fires at Fort Jackson, South Carolina, RGB and multispectral imagery were collected via drone both pre- and post-fire at five plots, with two additional unburned plots flown to serve as controls. Multispectral photogrammetric point clouds were generated and NDVI values were calculated for each point. Point clouds were segmented into 2-m height stratum layers, to compare NDVI values for different canopy height strata pre- and post-fire. Orthoimages of the understory, overstory, and traditional nadir views were generated. Conclusions: Findings showed that prescribed fire had a substantial effect on NDVI values up to 6 m in height, with only minor effects observed above 6 m. Ground cover under the canopy, typically occluded from overhead imagery, was classified with 87% accuracy. This study demonstrated the ability to digitally remove occluding tall vegetation using dDAP and to derive a more precise assessment of fire effects on ground and understory vegetation compared to two-dimensional satellite imagery.