Muhammad Usman Zaheer

Dr. Muhammad Usman Zaheer

Health Security Partners
orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 May 2021 in Antibiotics
Verified
Journal Article
Open access
PDF file
Muhammad UmairMuhammad Umair
Muhammad Umair
Muhammad Farooq TahirMuhammad Farooq Tahir
Muhammad Farooq Tahir
RURiasat Wasee Ullah
Riasat Wasee Ullah
JAJabir Ali
Jabir Ali
NSNaila Siddique
Naila Siddique
MMMashkoor Mohsin
Mashkoor Mohsin
Antimicrobial resistance (AMR) is a global health challenge and antimicrobial use (AMU) in the livestock sector has been considered as one of the contributing factors towards the development of AMR in bacteria. This study summarizes the results of a point prevalence survey conducted to monitor farm-level AMU in commercial broiler chicken farms in Punjab and Khyber Pakhtunkhwa (KPK) provinces of Pakistan. A cross-sectional study was conducted to quantify AMU and to check seasonal variations of AMU in 12 commercial broiler chicken farms (six from each province) during the summer and winter seasons of the year 2020–2021. AMU was recorded using three AMU metrics: kg, mg per population correction unit (mg/PCU), and mg/kg of final flock weight. A total of 22 antimicrobial drugs (348.59 kg) were used for therapeutic or prophylactic purposes in surveyed broiler chicken farms. The total combined AMU for all the broiler chicken farms was 462.57 mg/PCU. The use of most of the antimicrobials increased during winter flocks compared to summer. The top three antimicrobial drugs used during the summer were neomycin (111.39 mg/PCU), doxycycline (91.91 mg/PCU), and tilmicosin (77.22 mg/PCU), whereas doxycycline (196.81 mg/PCU), neomycin (136.74 mg/PCU), and amoxicillin (115.04 mg/PCU) during the winter. Overall, 60% of the antibiotics used in broiler chicken were critically important antimicrobial classes (CIA) for human medicine as characterized by the World Health Organization. Our findings showed high AMU in broiler chicken production and a call for urgent actions to regulate CIA use in food animals in Pakistan. This baseline survey is critical for the design and implementation of a subsequent national level AMU surveys that can include additional farming types, animals’ species, and geographical locations over a longer period of time.

22 February 2024 in Antibiotics
Verified
Journal Article
Open access
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YQYu Qiu
Yu Qiu
Jorge Pinto FerreiraJorge Pinto Ferreira
Jorge Pinto Ferreira
RURiasat Wasee Ullah
Riasat Wasee Ullah
PFPeter Augustus Flanagan
Peter Augustus Flanagan
MZMuhammad Usman Zaheer
Muhammad Usman Zaheer
MAMuhammad Akram
Muhammad Akram
The agriculture and food (agrifood) sectors play key roles in the emergence, spread, and containment of antimicrobial resistance (AMR). Pakistan’s first National Action Plan (NAP) on AMR was developed to guide One Health interventions to combat AMR through 2017–2022. To improve subsequent iterations, we assessed the implementation of Pakistan’s NAP in the agrifood sectors (NAPag) in October 2022, using the Progressive Management Pathway on AMR tool developed by the Food and Agriculture Organization of the United Nations (FAO). The assessment tool addressed four crucial focus areas of the NAPag: governance, awareness, evidence, and practices. Each focus area contains multiple topics, which involve four sequential stages of activities to progressively achieve systematic management of AMR risk in the agrifood sectors. High-level representatives of the NAPag stakeholders provided information for the assessment through pre-event documentary review and workshop discussions. The assessment results showed that Pakistan’s NAPag had an overall moderate coverage (59%) of the anticipated activities. Gaps were particularly notable in strengthening governance, good practices, and interventions in non-livestock sectors. Furthermore, only 12% of the evaluated activities were fully executed and documented, consistently remaining at the planning and piloting stages in the livestock sector across all the examined topics. Insufficient attention to non-livestock sectors, inadequate regulation and enforcement capacity, and resource constraints have hindered scalable and sustainable interventions under the current plan. This assessment provides valuable insights to strengthen the inclusiveness and contribution of the agrifood sectors in the next NAP iteration. In the short-to-medium term, strategic prioritization is necessary to optimize the use of limited resources and target the most critical gaps, such as improving awareness among key stakeholders and fortifying regulations for prudent antimicrobial use. In the long term, integration of AMR into the country’s broader health, development, and agricultural transformation agendas will be needed to generate sustainable benefits.

31 December 2022 in Preventive Veterinary Medicine
Verified
Journal Article
Closed access
ASAyesha Saman
Ayesha Saman
MCMamoona Chaudhry
Mamoona Chaudhry
MIMuhammad Ijaz
Muhammad Ijaz
WSWaseem Shaukat
Waseem Shaukat
MZMuhammad Usman Zaheer
Muhammad Usman Zaheer
Abdul REHMANAbdul REHMAN
Abdul REHMAN

21 November 2020 in Computational and Mathematical Methods in Medicine
Verified
Journal Article
Open access
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MZMuhammad Usman Zaheer
Muhammad Usman Zaheer
Mo D. SalmanMo D. Salman
Mo D. Salman
KSKay K. Steneroden
Kay K. Steneroden
SMSheryl Magzamen
Sheryl Magzamen
SWStephen E. Weber
Stephen E. Weber
Sangeeta RaoSangeeta Rao
Sangeeta Rao
Simulation modeling has become common for estimating the spread of highly contagious animal diseases. Several models have been developed to mimic the spread of foot-and-mouth disease (FMD) in specific regions or countries, conduct risk assessment, analyze outbreaks using historical data or hypothetical scenarios, assist in policy decisions during epidemics, formulate preparedness plans, and evaluate economic impacts. Majority of the available FMD simulation models were designed for and applied in disease-free countries, while there has been limited use of such models in FMD endemic countries. This paper’s objective was to report the findings from a study conducted to review the existing published original research literature on spatially explicit stochastic simulation (SESS) models of FMD spread, focusing on assessing these models for their potential use in endemic settings. The goal was to identify the specific components of endemic FMD needed to adapt these SESS models for their potential application in FMD endemic settings. This systematic review followed the PRISMA guidelines, and three databases were searched, which resulted in 1176 citations. Eighty citations finally met the inclusion criteria and were included in the qualitative synthesis, identifying nine unique SESS models. These SESS models were assessed for their potential application in endemic settings. The assessed SESS models can be adapted for use in FMD endemic countries by modifying the underlying code to include multiple cocirculating serotypes, routine prophylactic vaccination (RPV), and livestock population dynamics to more realistically mimic the endemic characteristics of FMD. The application of SESS models in endemic settings will help evaluate strategies for FMD control, which will improve livestock health, provide economic gains for producers, help alleviate poverty and hunger, and will complement efforts to achieve the Sustainable Development Goals.

1 January 2025 in Journal of Advanced Veterinary and Animal Research
Verified
Journal Article
Open access
PDF file
MAMuhammad Arshed
Muhammad Arshed
Muhammad UmairMuhammad Umair
Muhammad Umair
UTUsman Talib
Usman Talib
Muhammad Farooq TahirMuhammad Farooq Tahir
Muhammad Farooq Tahir
MAMuhammad Abubakar
Muhammad Abubakar
MZMuhammad Usman Zaheer
Muhammad Usman Zaheer
Antimicrobial resistance (AMR) is a global public health issue, causing an estimated 1.27 million deaths in 2019. This systematic review and meta-analysis aim to assess the burden of AMR in food animals in Pakistan, identify resistant microbes, and highlight emerging trends in multidrug resistance (MDR). The major databases were searched for articles published between 2016 and 2020 on the prevalence of AMR in food animals in Pakistan. A random-effects model was employed to pool the prevalence of antibiotic-resistant Enterobacteriaceae and non-Enterobacteriaceae pathogens. Among 1,145 studies, 35 met the inclusion criteria as evidence of AMR in food animals. Escherichia coli showed the highest resistance to ampicillin (59.5%), ciprofloxacin (49%), oxytetracycline (39%), and chloramphenicol (35%); Salmonella to ampicillin (78.4%), amoxicillin (53.9%), chloramphenicol (40%), tetracycline (39.3%), and ciprofloxacin (39%); Staphylococci to cefoxitin (53.8%) and penicillin (34.8%); and Campylobacter and Klebsiella to ciprofloxacin (50.4% and 83.3%, respectively). MDR was observed in E. coli (12/12 studies), Salmonella (7/10), Staphylococci (3/8), Campylobacter (3/3), and Klebsiella (1/3), with extensive drug resistance in E. coli (3/12), Salmonella (4/10), Campylobacter (1/3), and Klebsiella (2/2). Enterobacteriaceae showed significant resistance to tetracyclines (pooled prevalence/PPr = 0.75) and aminopenicillins (PPr = 0.74), whereas non-Enterobacteriaceae showed resistance to cephalosporins (PPr = 0.67) and aminopenicillins (PPr = 0.59), both with substantial heterogeneity. This review shows the existence of bacteria resistant to commonly used antimicrobials in food animals, potentially a threat to both human and animal health. The findings suggest the continuous monitoring of AMR and antimicrobial use (AMU) and the regulation of AMU in the food and agriculture sectors.

1 March 2025 in Veterinary Sciences
Verified
Journal Article
Open access
PDF file
MTMuhammad Farooq Tahir
Muhammad Farooq Tahir
RURiasat Wasee Ullah
Riasat Wasee Ullah
JWJing Wang
Jing Wang
KDKinzang Dukpa
Kinzang Dukpa
MZMuhammad Usman Zaheer
Muhammad Usman Zaheer
HIHamid Irshad
Hamid Irshad
Irrational use of antimicrobials in humans, livestock, and poultry is often cited as the key driver of the accelerated emergence of antimicrobial resistance (AMR) in humans and animals. In Pakistan, the use of antimicrobials in livestock and poultry is not well-regulated, owing to limited and/or ineffective implementation of existing legislations and lack of coordination amongst the key stakeholders. To gather data and information pertinent to the supply chain mapping and the usage of antibiotics in the livestock and poultry sectors of Pakistan, a national workshop for selected influential stakeholders was held in Islamabad, Pakistan during March 2020 to map the supply chain and the usage of antibiotics in the country. Participants from all relevant organizations identified the supply chain and discussed the status, challenges, and the way forward to enhance data collection and monitoring of antimicrobial usage (AMU) in livestock and poultry sectors to contain the emergence of AMR. The pre-workshop questionnaire was designed to gather relevant information on AMU and its distribution among diverse markets and users from the workshop participants, utilizing open-ended questions. A chart depicting the relative magnitude of an antimicrobial use (AMU) supply chain was constructed to illustrate the flow of antimicrobials from import and production to end-use at the farm level. This chart was shared with participants to gather their professional opinions and potential corrections. It also presented a list of agencies and their roles in regulating AMU, along with the types of AMU data available at each level. Specific recommendations were made at the end of the workshop to review and update legislation to cover the entire AMU supply chain, enhance regulations to restrict the use of antimicrobial growth promoters, build an integrated national AMU database system, and raise awareness about the responsible use of antimicrobials in the livestock and poultry sectors. It was concluded that the AMU supply chain in the veterinary sector of Pakistan is fragmented and is co-regulated by various federal and provincial stakeholders. There are some drugs, such as antibiotic growth promoters, which are not regulated at all. The approach and findings from this study can serve as a model to validate the use and management of antibiotics in other, similar countries currently grappling with serious antimicrobial resistance (AMR) crises.