Zachary B. Katz

Zachary B. Katz

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Zachary B. Katz

Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx NY 10461, USA

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 July 2015 in Nature Methods
Verified
Journal Article
Closed access
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NMNilah Monnier
Nilah Monnier
ZBZachary Barry
Zachary Barry
HPHye Yoon Park
Hye Yoon Park
KSKuan-Chung Su
Kuan-Chung Su
ZKZachary Katz
Zachary Katz
MBMark Bathe
Mark Bathe

1 September 2012 in Genes & Development
Verified
Journal Article
Open access
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ZKZachary B. Katz
Zachary B. Katz
AWAmber L. Wells
Amber L. Wells
HPHye Yoon Park
Hye Yoon Park
BWBin Wu
Bin Wu
SSShailesh M. Shenoy
Shailesh M. Shenoy
RSRobert H. Singer
Robert H. Singer
Directed cell motility is at the basis of biological phenomena such as development, wound healing, and metastasis. It has been shown that substrate attachments mediate motility by coupling the cell's cytoskeleton with force generation. However, it has been unclear how the persistence of cell directionality is facilitated. We show that mRNA localization plays an important role in this process, but the mechanism of action is still unknown. In this study, we show that the zipcode-binding protein 1 transports β-actin mRNA to the focal adhesion compartment, where it dwells for minutes, suggesting a means for associating its localization with motility through the formation of stable connections between adhesions and newly synthesized actin filaments. In order to demonstrate this, we developed an approach for assessing the functional consequences of β-actin mRNA and protein localization by tethering the mRNA to a specific location—in this case, the focal adhesion complex. This approach will have a significant impact on cell biology because it is now possible to forcibly direct any mRNA and its cognate protein to specific locations in the cell. This will reveal the importance of localized protein translation on various cellular processes.

13 January 2016 in eLife
Verified
Journal Article
Open access
ZKZachary B Katz
Zachary B Katz
BEBrian P English
Brian P English
TLTimothée Lionnet
Timothée Lionnet
YYYoung J Yoon
Young J Yoon
NMNilah Monnier
Nilah Monnier
RSRobert H Singer
Robert H Singer
Messenger RNA localization is important for cell motility by local protein translation. However, while single mRNAs can be imaged and their movements tracked in single cells, it has not yet been possible to determine whether these mRNAs are actively translating. Therefore, we imaged single β-actin mRNAs tagged with MS2 stem loops colocalizing with labeled ribosomes to determine when polysomes formed. A dataset of tracking information consisting of thousands of trajectories per cell demonstrated that mRNAs co-moving with ribosomes have significantly different diffusion properties from non-translating mRNAs that were exposed to translation inhibitors. These data indicate that ribosome load changes mRNA movement and therefore highly translating mRNAs move slower. Importantly, β-actin mRNA near focal adhesions exhibited sub-diffusive corralled movement characteristic of increased translation. This method can identify where ribosomes become engaged for local protein production and how spatial regulation of mRNA-protein interactions mediates cell directionality.

21 November 2016 in Nature Immunology
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Journal Article
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ZKZachary B Katz
Zachary B Katz
LNLucie Novotná
Lucie Novotná
ABAmy Blount
Amy Blount
BLBjörn F Lillemeier
Björn F Lillemeier

1 January 2012 in Journal of Cell Science
Verified
Journal Article
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WGWei Gu
Wei Gu
ZKZachary Katz
Zachary Katz
BWBin Wu
Bin Wu
HPHye Yoon Park
Hye Yoon Park
DLDeling Li
Deling Li
RSRobert H. Singer
Robert H. Singer
Metastasis involves tumor cell detachment from the primary tumor, and acquisition of migratory and invasive capabilities. These capabilities are mediated by multiple events, including loss of cell–cell contact, an increase in focal adhesion turnover and failure to maintain a normal cell polarity. We have previously reported that silencing of the expression of the zipcode-binding protein IMP1/ZBP1 in breast tumor patients is associated with metastasis. IMP1/ZBP1 selectively binds to a group of mRNAs that encode important mediators for cell adhesion and motility. Here, we show that in both T47D and MDA231 human breast carcinoma cells IMP1/ZBP1 functions to suppress cell invasion. Binding of ZBP1 to the mRNAs encoding E-cadherin, β-actin, α-actinin and the Arp2/3 complex facilitates localization of the mRNAs, which stabilizes cell–cell connections and focal adhesions. Our studies suggest a novel mechanism through which IMP1/ZBP1 simultaneously regulates the local expression of many cell-motility-related mRNAs to maintain cell adherence and polarity, decrease focal adhesion turnover and maintain a persistent and directional motility.

1 January 2015 in Journal of Cell Science
Verified
Journal Article
Open access
PDF file
TSTingting Song
Tingting Song
YZYi Zheng
Yi Zheng
YWYarong Wang
Yarong Wang
ZKZachary Katz
Zachary Katz
XLXin Liu
Xin Liu
WGWei Gu
Wei Gu
ZBP1-modulated localization of β-actin mRNA enables a cell to establish polarity and structural asymmetry. Although the mechanism of β-actin mRNA localization has been well established, the underlying mechanism of how a specific molecular motor contributes to the transport of the ZBP1 (also known as IGF2BP1) complex in non-neuronal cells remains elusive. In this study, we report the isolation and identification of KIF11, a microtubule motor, which physically interacts with ZBP1 and is a component of β-actin messenger ribonucleoprotein particles (mRNPs). We show that KIF11 colocalizes with the β-actin mRNA, and the ability of KIF11 to transport β-actin mRNA is dependent on ZBP1. We characterize the corresponding regions of ZBP1 and KIF11 that mediate the interaction of the two proteins in vitro and in vivo. Disruption of the in vivo interaction of KIF11 with ZBP1 delocalizes β-actin mRNA and affects cell migration. Our study reveals a molecular mechanism by which a particular microtubule motor mediates the transport of an mRNP through direct interaction with an mRNA-binding protein.