Hye Yoon Park

Hye Yoon Park

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Hye Yoon Park

Department of Electrical and Computer Engineering, University of Minnesota, Minneapolis, USA

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 January 2011 in Nature Methods
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TLTimothée Lionnet
Timothée Lionnet
KCKevin Czaplinski
Kevin Czaplinski
XDXavier Darzacq
Xavier Darzacq
YSYaron Shav-Tal
Yaron Shav-Tal
AWAmber L Wells
Amber L Wells
RSRobert H Singer
Robert H Singer
Tagging the endogenous beta-actin locus with an MS2-binding cassette allows live-cell imaging of mRNA in real time. Live-cell single mRNA imaging is a powerful tool but has been restricted in higher eukaryotes to artificial cell lines and reporter genes. We describe an approach that enables live-cell imaging of single endogenous labeled mRNA molecules transcribed in primary mammalian cells and tissue. We generated a knock-in mouse line with an MS2 binding site (MBS) cassette targeted to the 3′ untranslated region of the essential ββ-actin gene. As β-actin–MBS was ubiquitously expressed, we could uniquely address endogenous mRNA regulation in any tissue or cell type. We simultaneously followed transcription from the β-actin alleles in real time and observed transcriptional bursting in response to serum stimulation with precise temporal resolution. We tracked single endogenous labeled mRNA particles being transported in primary hippocampal neurons. The MBS cassette also enabled high-sensitivity fluorescence in situ hybridization (FISH), allowing detection and localization of single β-actin mRNA molecules in various mouse tissues.

24 January 2014 in Science
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HPHye Yoon Park
Hye Yoon Park
HLHyungsik Lim
Hyungsik Lim
YYYoung J. Yoon
Young J. Yoon
Antonia FollenziAntonia Follenzi
Antonia Follenzi
CNChiso Nwokafor
Chiso Nwokafor
RSRobert H. Singer
Robert H. Singer
The transcription and transport of messenger RNA (mRNA) are critical steps in regulating the spatial and temporal components of gene expression, but it has not been possible to observe the dynamics of endogenous mRNA in primary mammalian tissues. We have developed a transgenic mouse in which all β-actin mRNA is fluorescently labeled. We found that β-actin mRNA in primary fibroblasts localizes predominantly by diffusion and trapping as single mRNAs. In cultured neurons and acute brain slices, we found that multiple β-actin mRNAs can assemble together, travel by active transport, and disassemble upon depolarization by potassium chloride. Imaging of brain slices revealed immediate early induction of β-actin transcription after depolarization. Studying endogenous mRNA in live mouse tissues provides insight into its dynamic regulation within the context of the cellular and tissue microenvironment.

20 July 2015 in Nature Methods
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NMNilah Monnier
Nilah Monnier
ZBZachary Barry
Zachary Barry
HPHye Yoon Park
Hye Yoon Park
KSKuan-Chung Su
Kuan-Chung Su
ZKZachary Katz
Zachary Katz
MBMark Bathe
Mark Bathe

7 November 2022 in Nature Communications
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WCWoo-Hyun Cho
Woo-Hyun Cho
KNKyungchul Noh
Kyungchul Noh
BLByung Hun Lee
Byung Hun Lee
EBEllane Barcelon
Ellane Barcelon
SJSang Beom Jun
Sang Beom Jun
Sung Joong LeeSung Joong Lee
Sung Joong Lee
Astrocytes can affect animal behavior by regulating tripartite synaptic transmission, yet their influence on affective behavior remains largely unclear. Here we showed that hippocampal astrocyte calcium activity reflects mouse affective state during virtual elevated plus maze test using two-photon calcium imaging in vivo. Furthermore, optogenetic hippocampal astrocyte activation elevating intracellular calcium induced anxiolytic behaviors in astrocyte-specific channelrhodopsin 2 (ChR2) transgenic mice (hGFAP-ChR2 mice). As underlying mechanisms, we found ATP released from the activated hippocampal astrocytes increased excitatory synaptic transmission in dentate gyrus (DG) granule cells, which exerted anxiolytic effects. Our data uncover a role of hippocampal astrocytes in modulating mice anxiety-like behaviors by regulating ATP-mediated synaptic homeostasis in hippocampal DG granule cells. Thus, manipulating hippocampal astrocytes activity can be a therapeutic strategy to treat anxiety.

1 September 2012 in Genes & Development
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ZKZachary B. Katz
Zachary B. Katz
AWAmber L. Wells
Amber L. Wells
HPHye Yoon Park
Hye Yoon Park
BWBin Wu
Bin Wu
SSShailesh M. Shenoy
Shailesh M. Shenoy
RSRobert H. Singer
Robert H. Singer
Directed cell motility is at the basis of biological phenomena such as development, wound healing, and metastasis. It has been shown that substrate attachments mediate motility by coupling the cell's cytoskeleton with force generation. However, it has been unclear how the persistence of cell directionality is facilitated. We show that mRNA localization plays an important role in this process, but the mechanism of action is still unknown. In this study, we show that the zipcode-binding protein 1 transports β-actin mRNA to the focal adhesion compartment, where it dwells for minutes, suggesting a means for associating its localization with motility through the formation of stable connections between adhesions and newly synthesized actin filaments. In order to demonstrate this, we developed an approach for assessing the functional consequences of β-actin mRNA and protein localization by tethering the mRNA to a specific location—in this case, the focal adhesion complex. This approach will have a significant impact on cell biology because it is now possible to forcibly direct any mRNA and its cognate protein to specific locations in the cell. This will reveal the importance of localized protein translation on various cellular processes.

2 February 2012 in Nature Protocols
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TTTatjana Trcek
Tatjana Trcek
JCJeffrey A Chao
Jeffrey A Chao
DLDaniel R Larson
Daniel R Larson
HPHye Yoon Park
Hye Yoon Park
DZDaniel Zenklusen
Daniel Zenklusen
RSRobert H Singer
Robert H Singer