Deep Learning (DL), a successful promising approach for discriminative and generative tasks, has recently proved its high potential in 2D medical imaging analysis; however, physiological data in the form of 1D signals have yet to be beneficially exploited from this novel approach to fulfil the desired medical tasks. Therefore, in this paper we survey the latest scientific research on deep learning in physiological signal data such as electromyogram (EMG), electrocardiogram (ECG), electroencephalogram (EEG), and electrooculogram (EOG). We found 147 papers published between January 2018 and October 2019 inclusive from various journals and publishers. The objective of this paper is to conduct a detailed study to comprehend, categorize, and compare the key parameters of the deep-learning approaches that have been used in physiological signal analysis for various medical applications. The key parameters of deep-learning approach that we review are the input data type, deep-learning task, deep-learning model, training architecture, and dataset sources. Those are the main key parameters that affect system performance. We taxonomize the research works using deep-learning method in physiological signal analysis based on: (1) physiological signal data perspective, such as data modality and medical application; and (2) deep-learning concept perspective such as training architecture and dataset sources.
Chest X-ray radiographic (CXR) imagery enables earlier and easier lung disease diagnosis. Therefore, in this paper, we propose a deep learning method using a transfer learning technique to classify lung diseases on CXR images to improve the efficiency and accuracy of computer-aided diagnostic systems’ (CADs’) diagnostic performance. Our proposed method is a one-step, end-to-end learning, which means that raw CXR images are directly inputted into a deep learning model (EfficientNet v2-M) to extract their meaningful features in identifying disease categories. We experimented using our proposed method on three classes of normal, pneumonia, and pneumothorax of the U.S. National Institutes of Health (NIH) data set, and achieved validation performances of loss = 0.6933, accuracy = 82.15%, sensitivity = 81.40%, and specificity = 91.65%. We also experimented on the Cheonan Soonchunhyang University Hospital (SCH) data set on four classes of normal, pneumonia, pneumothorax, and tuberculosis, and achieved validation performances of loss = 0.7658, accuracy = 82.20%, sensitivity = 81.40%, and specificity = 94.48%; testing accuracy of normal, pneumonia, pneumothorax, and tuberculosis classes was 63.60%, 82.30%, 82.80%, and 89.90%, respectively.
In this study, we propose a multi-class classification method by learning lung disease images with Convolutional Neural Network (CNN). As the image data for learning, the U.S. National Institutes of Health (NIH) dataset divided into Normal, Pneumonia, and Pneumothorax and the Cheonan Soonchunhyang University Hospital dataset including Tuberculosis were used. To improve performance, preprocessing was performed with Center Crop while maintaining the aspect ratio of 1:1. As a Noisy Student of EfficientNet B7, fine-tuning learning was performed using the weights learned from ImageNet, and the features of each layer were maximally utilized using the Multi GAP structure. As a result of the experiment, Benchmarks measured with the NIH dataset showed the highest performance among the tested models with an accuracy of 85.32%, and the four-class predictions measured with data from Soonchunhyang University Hospital in Cheonan had an average accuracy of 96.1%, an average sensitivity of 92.2%, an average specificity of 97.4%, and an average inference time of 0.2 s.
One of the most common methods for diagnosing coronary artery disease is the use of the coronary artery calcium score CT. However, the current diagnostic method using the coronary artery calcium score CT requires a considerable time, because the radiologist must manually check the CT images one-by-one, and check the exact range. In this paper, three CNN models are applied for 1200 normal cardiovascular CT images, and 1200 CT images in which calcium is present in the cardiovascular system. We conduct the experimental test by classifying the CT image data into the original coronary artery calcium score CT images containing the entire rib cage, the cardiac segmented images that cut out only the heart region, and cardiac cropped images that are created by using the cardiac images that are segmented into nine sub-parts and enlarged. As a result of the experimental test to determine the presence of calcium in a given CT image using Inception Resnet v2, VGG, and Resnet 50 models, the highest accuracy of 98.52% was obtained when cardiac cropped image data was applied using the Resnet 50 model. Therefore, in this paper, it is expected that through further research, both the simple presence of calcium and the automation of the calcium analysis score for each coronary artery calcium score CT will become possible.
Semantic segmentation of large-scale outdoor 3D LiDAR point clouds becomes essential to understand the scene environment in various applications, such as geometry mapping, autonomous driving, and more. With an advantage of being a 3D metric space, 3D LiDAR point clouds, on the other hand, pose a challenge for a deep learning approach, due to their unstructured, unorder, irregular, and large-scale characteristics. Therefore, this paper presents an encoder–decoder shared multi-layer perceptron (MLP) with multiple losses, to address an issue of this semantic segmentation. The challenge rises a trade-off between efficiency and effectiveness in performance. To balance this trade-off, we proposed common mechanisms, which is simple and yet effective, by defining a random point sampling layer, an attention-based pooling layer, and a summation of multiple losses integrated with the encoder–decoder shared MLPs method for the large-scale outdoor point clouds semantic segmentation. We conducted our experiments on the following two large-scale benchmark datasets: Toronto-3D and DALES dataset. Our experimental results achieved an overall accuracy (OA) and a mean intersection over union (mIoU) of both the Toronto-3D dataset, with 83.60% and 71.03%, and the DALES dataset, with 76.43% and 59.52%, respectively. Additionally, our proposed method performed a few numbers of parameters of the model, and faster than PointNet++ by about three times during inferencing.
About Me
Research Interests : Deep Learning, Image Processing, Computer Graphics, Computer Vision, BioInformatics
Research Interests : Deep Learning, Image Processing, Computer Graphics, Computer Vision, BioInformatics