• We harmonised nine macrophyte-based approaches for assessing lake ecological status. • We established relationships between the common view and nutrient concentrations. • Submerged vegetation decrease and free-floating plants increase along the status gradient. • We describe indicator taxa for ‘good’ and ‘less than good’ ecological status. • We establish a ‘guiding image’ of the macrophyte community at ‘good’ ecological status.

Communities of symbiotic microorganisms that colonize the gastrointestinal tract play an important role in food digestion and protection against opportunistic microbes. Diet diversity increases the number of symbionts in the intestines, a benefit that is considered to impose no cost for the host organism. However, less is known about the possible immunological investments that hosts have to make in order to control the infections caused by symbiont populations that increase because of diet diversity. Using taxonomical composition analysis of the 16S rRNA V3 region, we show that enterococci are the dominating group of bacteria in the midgut of the larvae of the greater wax moth (Galleria mellonella). We found that the number of colony-forming units of enterococci and expressions of certain immunity-related antimicrobial peptide (AMP) genes such as Gallerimycin, Gloverin, 6-tox, Cecropin-D and Galiomicin increased in response to a more diverse diet, which in turn decreased the encapsulation response of the larvae. Treatment with antibiotics significantly lowered the expression of all AMP genes. Diet and antibiotic treatment interaction did not affect the expression of Gloverin and Galiomicin AMP genes, but significantly influenced the expression of Gallerimycin, 6-tox and Cecropin-D. Taken together, our results suggest that diet diversity influences microbiome diversity and AMP gene expression, ultimately affecting an organism9s capacity to mount an immune response. Elevated basal levels of immunity-related genes (Gloverin and Galiomicin) might act as a prophylactic against opportunistic infections and as a mechanism that controls the gut symbionts. This would indicate that a diverse diet imposes higher immunity costs on organisms.

Storms are the main abiotic disturbance in European forests, effects of which are expected to intensify in the future, hence the importance of forest stand stability is increasing. The predisposition of Norway spruce to wind damage appears to be enhanced by pathogens such as Heterobasidion spp., which reduce stability of individual trees. However, detailed information about the effects of the root rot on the stability of individual trees across diverse soil types is still lacking. The aim of the study was to assess the effect of root rot on the individual tree stability of Norway spruce growing on drained peat and mineral soils. In total, 77 Norway spruce trees (age 50–80 years) growing in four stands were tested under static loading. The presence of Heterobasidion spp. had a significant negative effect on the bending moment at primary and secondary failure of the tested trees irrespectively of soil type. This suggests increased legacy effects (e.g., susceptibility to pathogens and pests due to fractured roots and altered water uptake) of storms. Damaged trees act as weak spots increasing the susceptibility of stands to wind damage, thus forming a negative feedback loop and contributing to an ongoing decline in vitality of Norway spruce stands following storms in the study region in the future. Accordingly, the results support the importance of timely identification of the decayed trees, lowering stand density and/or shortening rotation period as the measures to counteract the increasing effects of storms on Norway spruce stands.

Listeria spp. is a diverse genus of Gram-positive bacteria commonly present in the environment while L. monocytogenes and L. ivanovii are well known human and ruminant pathogens. The aim of the present study was to reveal the prevalence and genetic diversity of L. monocytogenes and other Listeria spp. and to identify the factors related to the abundance of pathogen at cattle farms. A total of 521 animal and environmental samples from 27 meat and dairy cattle farms were investigated and the genetic diversity of L. monocytogenes isolates was studied with WGS. The prevalence of Listeria was 58.9%, while of L. monocytogenes it was −11%. The highest prevalence of L. monocytogenes was found in the environment—soil samples near to manure storage (93%), mixed feed from the feeding trough and hay (29%), water samples from farms drinking trough (28%) and cattle feces (28%). Clonal complexes (CC) of CC37 (30%), CC11 (20%) and CC18 (17%) (all IIa serogroup) were predominant L. monocytogenes clones. CC18, CC37 and CC8 were isolated from case farms and CC37, CC11 and CC18 from farms without listeriosis history. Only one hypervirulent CC4 (1%) was isolated from the case farm. Sequence types (STs) were not associated with the isolation source, except for ST7, which was significantly associated with soil (p < 0.05). The contamination of soil, feeding tables and troughs with L. monocytogenes was associated with an increased prevalence of L. monocytogenes at farms. Our study indicates the importance of hygienic practice in the prevention of the dissemination of L. monocytogenes in the cattle farm environment.